Cluster: HRGMv2_0159_CGC97
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0159_22 | HRGMv2_0159_22_52 | 82109 | 85357 | + | 1.B.14.6.1 |
| sulfatase | HRGMv2_0159_22 | HRGMv2_0159_22_53 | 85378 | 87126 | + | S1_27 |
| CAZyme | HRGMv2_0159_22 | HRGMv2_0159_22_54 | 87143 | 88825 | + | GH165 |
| CAZyme | HRGMv2_0159_22 | HRGMv2_0159_22_55 | 88839 | 90551 | + | GH165 |
| pfam | HRGMv2_0159_22 | HRGMv2_0159_22_56 | 90564 | 92126 | + | PKD | PQQ_2 | Beta-prop_ACSF4 | PKD_4 |
| CAZyme | HRGMv2_0159_22 | HRGMv2_0159_22_57 | 92149 | 93702 | + | GH165 |
Gene ID: HRGMv2_0159_22_52
Type: TC
Location: 82109 - 85357 (+)
Type: TC
Location: 82109 - 85357 (+)
Gene ID: HRGMv2_0159_22_53
Type: sulfatase
Location: 85378 - 87126 (+)
Type: sulfatase
Location: 85378 - 87126 (+)
Gene ID: HRGMv2_0159_22_54
Type: CAZyme
Location: 87143 - 88825 (+)
Type: CAZyme
Location: 87143 - 88825 (+)
Gene ID: HRGMv2_0159_22_55
Type: CAZyme
Location: 88839 - 90551 (+)
Type: CAZyme
Location: 88839 - 90551 (+)
Gene ID: HRGMv2_0159_22_56
Type: pfam
Location: 90564 - 92126 (+)
Type: pfam
Location: 90564 - 92126 (+)
Gene ID: HRGMv2_0159_22_57
Type: CAZyme
Location: 92149 - 93702 (+)
Type: CAZyme
Location: 92149 - 93702 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0159_22_56 | vegetarian > omnivore | 1.11789 | 0.00744 |