Cluster: HRGMv2_0159_CGC91
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_02965
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_21 | HRGMv2_0159_21_4 | 4480 | 5853 | - | GH144 |
| CAZyme | HRGMv2_0159_21 | HRGMv2_0159_21_5 | 5902 | 8211 | - | GH3 |
| pfam | HRGMv2_0159_21 | HRGMv2_0159_21_6 | 8355 | 9884 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0159_21 | HRGMv2_0159_21_7 | 9897 | 12962 | - | 1.B.14.6.1 |
| STP | HRGMv2_0159_21 | HRGMv2_0159_21_8 | 13211 | 14176 | - | PfkB |
| CAZyme | HRGMv2_0159_21 | HRGMv2_0159_21_9 | 14416 | 16572 | - | GH92 |
| CAZyme | HRGMv2_0159_21 | HRGMv2_0159_21_10 | 16595 | 18703 | - | GH43_3 |
| CAZyme | HRGMv2_0159_21 | HRGMv2_0159_21_11 | 18807 | 19985 | - | GH76 |
| pfam | HRGMv2_0159_21 | HRGMv2_0159_21_12 | 20042 | 21220 | - | SusE |
| TC | HRGMv2_0159_21 | HRGMv2_0159_21_13 | 21259 | 22872 | - | 8.A.46.1.4 |
| TC | HRGMv2_0159_21 | HRGMv2_0159_21_14 | 22900 | 26016 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0159_21 | HRGMv2_0159_21_15 | 26147 | 27958 | - | GH2 |
Gene ID: HRGMv2_0159_21_4
Type: CAZyme
Location: 4480 - 5853 (-)
Type: CAZyme
Location: 4480 - 5853 (-)
Gene ID: HRGMv2_0159_21_5
Type: CAZyme
Location: 5902 - 8211 (-)
Type: CAZyme
Location: 5902 - 8211 (-)
Gene ID: HRGMv2_0159_21_6
Type: pfam
Location: 8355 - 9884 (-)
Type: pfam
Location: 8355 - 9884 (-)
Gene ID: HRGMv2_0159_21_7
Type: TC
Location: 9897 - 12962 (-)
Type: TC
Location: 9897 - 12962 (-)
Gene ID: HRGMv2_0159_21_8
Type: STP
Location: 13211 - 14176 (-)
Type: STP
Location: 13211 - 14176 (-)
Gene ID: HRGMv2_0159_21_9
Type: CAZyme
Location: 14416 - 16572 (-)
Type: CAZyme
Location: 14416 - 16572 (-)
Gene ID: HRGMv2_0159_21_10
Type: CAZyme
Location: 16595 - 18703 (-)
Type: CAZyme
Location: 16595 - 18703 (-)
Gene ID: HRGMv2_0159_21_11
Type: CAZyme
Location: 18807 - 19985 (-)
Type: CAZyme
Location: 18807 - 19985 (-)
Gene ID: HRGMv2_0159_21_12
Type: pfam
Location: 20042 - 21220 (-)
Type: pfam
Location: 20042 - 21220 (-)
Gene ID: HRGMv2_0159_21_13
Type: TC
Location: 21259 - 22872 (-)
Type: TC
Location: 21259 - 22872 (-)
Gene ID: HRGMv2_0159_21_14
Type: TC
Location: 22900 - 26016 (-)
Type: TC
Location: 22900 - 26016 (-)
Gene ID: HRGMv2_0159_21_15
Type: CAZyme
Location: 26147 - 27958 (-)
Type: CAZyme
Location: 26147 - 27958 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.