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Cluster: HRGMv2_0159_CGC90

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_20 HRGMv2_0159_20_144 153770 155209 - 2.A.21.9.1
pfam HRGMv2_0159_20 HRGMv2_0159_20_145 155229 156359 - KdpD
NULL(UNKNOWN) HRGMv2_0159_20 HRGMv2_0159_20_146 156443 157216 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0159_20 HRGMv2_0159_20_147 157329 157901 - 3.A.3.7.2
TC HRGMv2_0159_20 HRGMv2_0159_20_148 157918 159951 - 3.A.3.7.2
TC HRGMv2_0159_20 HRGMv2_0159_20_149 159970 161676 - 3.A.3.7.2
NULL(UNKNOWN) HRGMv2_0159_20 HRGMv2_0159_20_150 161808 161987 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0159_20 HRGMv2_0159_20_151 162256 164508 + GT20
CAZyme HRGMv2_0159_20 HRGMv2_0159_20_152 164521 166311 + GH15
Gene ID: HRGMv2_0159_20_144
Type: TC
Location: 153770 - 155209 (-)
Gene ID: HRGMv2_0159_20_145
Type: pfam
Location: 155229 - 156359 (-)
Gene ID: HRGMv2_0159_20_146
Type:
Location: 156443 - 157216 (-)
Gene ID: HRGMv2_0159_20_147
Type: TC
Location: 157329 - 157901 (-)
Gene ID: HRGMv2_0159_20_148
Type: TC
Location: 157918 - 159951 (-)
Gene ID: HRGMv2_0159_20_149
Type: TC
Location: 159970 - 161676 (-)
Gene ID: HRGMv2_0159_20_150
Type:
Location: 161808 - 161987 (-)
Gene ID: HRGMv2_0159_20_151
Type: CAZyme
Location: 162256 - 164508 (+)
Gene ID: HRGMv2_0159_20_152
Type: CAZyme
Location: 164521 - 166311 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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