dbCAN Logo

Cluster: HRGMv2_0159_CGC88

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_19 HRGMv2_0159_19_61 60116 61444 + 2.A.66.1.4
pfam HRGMv2_0159_19 HRGMv2_0159_19_62 61499 62209 + AA_kinase
CAZyme HRGMv2_0159_19 HRGMv2_0159_19_63 62377 63930 - GH50
CAZyme HRGMv2_0159_19 HRGMv2_0159_19_64 63941 65353 - GH50
CAZyme HRGMv2_0159_19 HRGMv2_0159_19_65 65357 67984 - CBM57 | GH2
pfam HRGMv2_0159_19 HRGMv2_0159_19_66 68032 70140 - BACON | BACON | BACON
pfam HRGMv2_0159_19 HRGMv2_0159_19_67 70172 71785 - SusD_RagB | SusD-like_3
TC HRGMv2_0159_19 HRGMv2_0159_19_68 71800 74859 - 1.B.14.6.1
Gene ID: HRGMv2_0159_19_61
Type: TC
Location: 60116 - 61444 (+)
Gene ID: HRGMv2_0159_19_62
Type: pfam
Location: 61499 - 62209 (+)
Gene ID: HRGMv2_0159_19_63
Type: CAZyme
Location: 62377 - 63930 (-)
Gene ID: HRGMv2_0159_19_64
Type: CAZyme
Location: 63941 - 65353 (-)
Gene ID: HRGMv2_0159_19_65
Type: CAZyme
Location: 65357 - 67984 (-)
Gene ID: HRGMv2_0159_19_66
Type: pfam
Location: 68032 - 70140 (-)
Gene ID: HRGMv2_0159_19_67
Type: pfam
Location: 70172 - 71785 (-)
Gene ID: HRGMv2_0159_19_68
Type: TC
Location: 71800 - 74859 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List