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Cluster: HRGMv2_0159_CGC87

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0159_18 HRGMv2_0159_18_133 166912 169110 + GH92
TF HRGMv2_0159_18 HRGMv2_0159_18_134 169305 169895 + GerE
STP HRGMv2_0159_18 HRGMv2_0159_18_135 169967 170980 + FecR
TC HRGMv2_0159_18 HRGMv2_0159_18_136 171248 174616 + 1.B.14.6.1
pfam HRGMv2_0159_18 HRGMv2_0159_18_137 174640 176286 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0159_18 HRGMv2_0159_18_138 176322 177314 + GH43_18
NULL(UNKNOWN) HRGMv2_0159_18 HRGMv2_0159_18_139 177331 179406 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0159_18 HRGMv2_0159_18_140 179559 181553 + GH97
Gene ID: HRGMv2_0159_18_133
Type: CAZyme
Location: 166912 - 169110 (+)
Gene ID: HRGMv2_0159_18_134
Type: TF
Location: 169305 - 169895 (+)
Gene ID: HRGMv2_0159_18_135
Type: STP
Location: 169967 - 170980 (+)
Gene ID: HRGMv2_0159_18_136
Type: TC
Location: 171248 - 174616 (+)
Gene ID: HRGMv2_0159_18_137
Type: pfam
Location: 174640 - 176286 (+)
Gene ID: HRGMv2_0159_18_138
Type: CAZyme
Location: 176322 - 177314 (+)
Gene ID: HRGMv2_0159_18_139
Type:
Location: 177331 - 179406 (+)
Gene ID: HRGMv2_0159_18_140
Type: CAZyme
Location: 179559 - 181553 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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