Cluster: HRGMv2_0159_CGC85
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_18 | HRGMv2_0159_18_45 | 57419 | 57832 | - | CBM35 |
| CAZyme | HRGMv2_0159_18 | HRGMv2_0159_18_46 | 57838 | 59235 | - | GH27 |
| pfam | HRGMv2_0159_18 | HRGMv2_0159_18_47 | 59237 | 60775 | - | BT_3987-like_N |
| pfam | HRGMv2_0159_18 | HRGMv2_0159_18_48 | 60818 | 62725 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0159_18 | HRGMv2_0159_18_49 | 62750 | 66139 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0159_18_45
Type: CAZyme
Location: 57419 - 57832 (-)
Type: CAZyme
Location: 57419 - 57832 (-)
Gene ID: HRGMv2_0159_18_46
Type: CAZyme
Location: 57838 - 59235 (-)
Type: CAZyme
Location: 57838 - 59235 (-)
Gene ID: HRGMv2_0159_18_47
Type: pfam
Location: 59237 - 60775 (-)
Type: pfam
Location: 59237 - 60775 (-)
Gene ID: HRGMv2_0159_18_48
Type: pfam
Location: 60818 - 62725 (-)
Type: pfam
Location: 60818 - 62725 (-)
Gene ID: HRGMv2_0159_18_49
Type: TC
Location: 62750 - 66139 (-)
Type: TC
Location: 62750 - 66139 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0159_18_45 | vegan > omnivore | 1.98124 | 0.00020 |
| HRGMv2_0159_18_46 | vegan > omnivore | 2.02376 | 0.00020 |
| HRGMv2_0159_18_47 | vegan > omnivore | 1.29600 | 0.00020 |
| HRGMv2_0159_18_48 | vegan > omnivore | 1.94059 | 0.00020 |
| HRGMv2_0159_18_49 | vegan > omnivore | 1.92836 | 0.00020 |