Cluster: HRGMv2_0159_CGC76
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0159_16 | HRGMv2_0159_16_107 | 151722 | 155048 | - | 1.B.14.6.1 |
| TF | HRGMv2_0159_16 | HRGMv2_0159_16_108 | 155387 | 159322 | + | HTH_AraC |
| pfam | HRGMv2_0159_16 | HRGMv2_0159_16_109 | 159356 | 160051 | - | RadC | UPF0758_N |
| CAZyme | HRGMv2_0159_16 | HRGMv2_0159_16_110 | 160194 | 162224 | + | GH20 |
| CAZyme | HRGMv2_0159_16 | HRGMv2_0159_16_111 | 162494 | 163483 | - | GT2 |
| TF | HRGMv2_0159_16 | HRGMv2_0159_16_112 | 163603 | 164196 | - | GerE |
| STP | HRGMv2_0159_16 | HRGMv2_0159_16_113 | 164356 | 165357 | + | FecR |
| TC | HRGMv2_0159_16 | HRGMv2_0159_16_114 | 165379 | 168735 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0159_16 | HRGMv2_0159_16_115 | 168757 | 170574 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_0159_16 | HRGMv2_0159_16_116 | 170598 | 171923 | + | CBM32 |
| CAZyme | HRGMv2_0159_16 | HRGMv2_0159_16_117 | 171962 | 173971 | + | GH97 |
Gene ID: HRGMv2_0159_16_107
Type: TC
Location: 151722 - 155048 (-)
Type: TC
Location: 151722 - 155048 (-)
Gene ID: HRGMv2_0159_16_108
Type: TF
Location: 155387 - 159322 (+)
Type: TF
Location: 155387 - 159322 (+)
Gene ID: HRGMv2_0159_16_109
Type: pfam
Location: 159356 - 160051 (-)
Type: pfam
Location: 159356 - 160051 (-)
Gene ID: HRGMv2_0159_16_110
Type: CAZyme
Location: 160194 - 162224 (+)
Type: CAZyme
Location: 160194 - 162224 (+)
Gene ID: HRGMv2_0159_16_111
Type: CAZyme
Location: 162494 - 163483 (-)
Type: CAZyme
Location: 162494 - 163483 (-)
Gene ID: HRGMv2_0159_16_112
Type: TF
Location: 163603 - 164196 (-)
Type: TF
Location: 163603 - 164196 (-)
Gene ID: HRGMv2_0159_16_113
Type: STP
Location: 164356 - 165357 (+)
Type: STP
Location: 164356 - 165357 (+)
Gene ID: HRGMv2_0159_16_114
Type: TC
Location: 165379 - 168735 (+)
Type: TC
Location: 165379 - 168735 (+)
Gene ID: HRGMv2_0159_16_115
Type: pfam
Location: 168757 - 170574 (+)
Type: pfam
Location: 168757 - 170574 (+)
Gene ID: HRGMv2_0159_16_116
Type: CAZyme
Location: 170598 - 171923 (+)
Type: CAZyme
Location: 170598 - 171923 (+)
Gene ID: HRGMv2_0159_16_117
Type: CAZyme
Location: 171962 - 173971 (+)
Type: CAZyme
Location: 171962 - 173971 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0159_16_107 | vegan > omnivore | 1.65634 | 0.00020 |
| HRGMv2_0159_16_107 | vegetarian > omnivore | 1.79556 | 0.00744 |
| HRGMv2_0159_16_108 | vegan > omnivore | 1.79737 | 0.00020 |
| HRGMv2_0159_16_108 | vegetarian > omnivore | 2.03401 | 0.00744 |
| HRGMv2_0159_16_110 | vegan > omnivore | 1.49822 | 0.00020 |
| HRGMv2_0159_16_110 | vegetarian > omnivore | 1.60616 | 0.00744 |