dbCAN HGM

Cluster: HRGMv2_0159_CGC68

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_85	95865	96839	+	GT2
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_86	96852	98048	+	GT2
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_87	98137	99252	+	GT4
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_88	100252	101367	+	GT94
TC	HRGMv2_0159_14	HRGMv2_0159_14_89	101360	102814	+	2.A.66.2.23
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_90	102856	103983	+	GT4
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_91	104012	105187	+	GT4
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_92	105184	105936	+	GT32
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_93	105955	106812	+	GT2
pfam	HRGMv2_0159_14	HRGMv2_0159_14_94	106840	107610	+	MetW \| Methyltransf_11 \| Methyltransf_23 \| Methyltransf_25
pfam	HRGMv2_0159_14	HRGMv2_0159_14_95	107618	109156	+	CotH
CAZyme	HRGMv2_0159_14	HRGMv2_0159_14_96	109187	110401	+	GT2
STP	HRGMv2_0159_14	HRGMv2_0159_14_97	110472	113129	+	HATPase_c \| HisKA \| Response_reg
pfam	HRGMv2_0159_14	HRGMv2_0159_14_98	113284	114384	+	Exo_endo_phos
TC	HRGMv2_0159_14	HRGMv2_0159_14_99	114518	117895	-	1.B.14.6.3
TC	HRGMv2_0159_14	HRGMv2_0159_14_100	118112	119803	-	3.A.1.120.6

Gene ID: HRGMv2_0159_14_85
Type: CAZyme
Location: 95865 - 96839 (+)

Gene ID: HRGMv2_0159_14_86
Type: CAZyme
Location: 96852 - 98048 (+)

Gene ID: HRGMv2_0159_14_87
Type: CAZyme
Location: 98137 - 99252 (+)

Gene ID: HRGMv2_0159_14_88
Type: CAZyme
Location: 100252 - 101367 (+)

Gene ID: HRGMv2_0159_14_89
Type: TC
Location: 101360 - 102814 (+)

Gene ID: HRGMv2_0159_14_90
Type: CAZyme
Location: 102856 - 103983 (+)

Gene ID: HRGMv2_0159_14_91
Type: CAZyme
Location: 104012 - 105187 (+)

Gene ID: HRGMv2_0159_14_92
Type: CAZyme
Location: 105184 - 105936 (+)

Gene ID: HRGMv2_0159_14_93
Type: CAZyme
Location: 105955 - 106812 (+)

Gene ID: HRGMv2_0159_14_94
Type: pfam
Location: 106840 - 107610 (+)

Gene ID: HRGMv2_0159_14_95
Type: pfam
Location: 107618 - 109156 (+)

Gene ID: HRGMv2_0159_14_96
Type: CAZyme
Location: 109187 - 110401 (+)

Gene ID: HRGMv2_0159_14_97
Type: STP
Location: 110472 - 113129 (+)

Gene ID: HRGMv2_0159_14_98
Type: pfam
Location: 113284 - 114384 (+)

Gene ID: HRGMv2_0159_14_99
Type: TC
Location: 114518 - 117895 (-)

Gene ID: HRGMv2_0159_14_100
Type: TC
Location: 118112 - 119803 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0159_14_85	vegetarian > vegan	1.47984	0.04720
HRGMv2_0159_14_99	vegan > omnivore	1.94582	0.00020
HRGMv2_0159_14_99	vegetarian > omnivore	2.00306	0.00744