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Cluster: HRGMv2_0159_CGC66

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_13 HRGMv2_0159_13_87 145934 146851 + 2.A.115.1.5
sulfatase HRGMv2_0159_13 HRGMv2_0159_13_88 146899 147483 + S1_7
TC HRGMv2_0159_13 HRGMv2_0159_13_89 147515 148357 + 1.A.30.1.3
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_90 148431 150638 - GH92
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_91 150649 152835 - GH36
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_92 152839 154773 - CE20 | CE20
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_93 154803 156773 - GH36
TF HRGMv2_0159_13 HRGMv2_0159_13_94 156960 161018 - HTH_AraC
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_95 161112 163874 - GH92
pfam HRGMv2_0159_13 HRGMv2_0159_13_96 163957 165618 - SusD_RagB | SusD-like_3
TC HRGMv2_0159_13 HRGMv2_0159_13_97 165640 168639 - 1.B.14.6.1
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_98 168942 171344 + GH95
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_99 171353 173029 + GH110
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_100 173081 175402 - GH92
peptidase HRGMv2_0159_13 HRGMv2_0159_13_101 175662 176600 - U32.UPW
pfam HRGMv2_0159_13 HRGMv2_0159_13_102 177102 177629 + SpoU_methylase
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_103 178072 180024 - CBM51 | GH27
NULL(UNKNOWN) HRGMv2_0159_13 HRGMv2_0159_13_104 180235 181629 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_105 181832 183643 + GH105
NULL(UNKNOWN) HRGMv2_0159_13 HRGMv2_0159_13_106 183670 187302 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_107 187344 190586 + GH2
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_108 191262 192896 - GH78
NULL(UNKNOWN) HRGMv2_0159_13 HRGMv2_0159_13_109 192904 194670 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0159_13 HRGMv2_0159_13_110 194673 196283 - SusD_RagB | SusD-like_3
TC HRGMv2_0159_13 HRGMv2_0159_13_111 196302 199361 - 1.B.14.6.13
CAZyme HRGMv2_0159_13 HRGMv2_0159_13_112 199798 202053 + GH92
Gene ID: HRGMv2_0159_13_87
Type: TC
Location: 145934 - 146851 (+)
Gene ID: HRGMv2_0159_13_88
Type: sulfatase
Location: 146899 - 147483 (+)
Gene ID: HRGMv2_0159_13_89
Type: TC
Location: 147515 - 148357 (+)
Gene ID: HRGMv2_0159_13_90
Type: CAZyme
Location: 148431 - 150638 (-)
Gene ID: HRGMv2_0159_13_91
Type: CAZyme
Location: 150649 - 152835 (-)
Gene ID: HRGMv2_0159_13_92
Type: CAZyme
Location: 152839 - 154773 (-)
Gene ID: HRGMv2_0159_13_93
Type: CAZyme
Location: 154803 - 156773 (-)
Gene ID: HRGMv2_0159_13_94
Type: TF
Location: 156960 - 161018 (-)
Gene ID: HRGMv2_0159_13_95
Type: CAZyme
Location: 161112 - 163874 (-)
Gene ID: HRGMv2_0159_13_96
Type: pfam
Location: 163957 - 165618 (-)
Gene ID: HRGMv2_0159_13_97
Type: TC
Location: 165640 - 168639 (-)
Gene ID: HRGMv2_0159_13_98
Type: CAZyme
Location: 168942 - 171344 (+)
Gene ID: HRGMv2_0159_13_99
Type: CAZyme
Location: 171353 - 173029 (+)
Gene ID: HRGMv2_0159_13_100
Type: CAZyme
Location: 173081 - 175402 (-)
Gene ID: HRGMv2_0159_13_101
Type: peptidase
Location: 175662 - 176600 (-)
Gene ID: HRGMv2_0159_13_102
Type: pfam
Location: 177102 - 177629 (+)
Gene ID: HRGMv2_0159_13_103
Type: CAZyme
Location: 178072 - 180024 (-)
Gene ID: HRGMv2_0159_13_104
Type:
Location: 180235 - 181629 (+)
Gene ID: HRGMv2_0159_13_105
Type: CAZyme
Location: 181832 - 183643 (+)
Gene ID: HRGMv2_0159_13_106
Type:
Location: 183670 - 187302 (+)
Gene ID: HRGMv2_0159_13_107
Type: CAZyme
Location: 187344 - 190586 (+)
Gene ID: HRGMv2_0159_13_108
Type: CAZyme
Location: 191262 - 192896 (-)
Gene ID: HRGMv2_0159_13_109
Type:
Location: 192904 - 194670 (-)
Gene ID: HRGMv2_0159_13_110
Type: pfam
Location: 194673 - 196283 (-)
Gene ID: HRGMv2_0159_13_111
Type: TC
Location: 196302 - 199361 (-)
Gene ID: HRGMv2_0159_13_112
Type: CAZyme
Location: 199798 - 202053 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0159_13_97 vegetarian > omnivore 2.55581 0.00744
HRGMv2_0159_13_97 vegan > omnivore 5.97939 0.00020
HRGMv2_0159_13_98 vegan > omnivore 7.29960 0.00020
HRGMv2_0159_13_99 vegan > omnivore 8.08798 0.00020
HRGMv2_0159_13_103 vegan > omnivore 2.13454 0.00020
HRGMv2_0159_13_103 vegetarian > omnivore 1.13599 0.00744
HRGMv2_0159_13_104 vegan > omnivore 2.36815 0.00020
HRGMv2_0159_13_104 vegetarian > omnivore 1.77883 0.00744
HRGMv2_0159_13_105 vegetarian > omnivore 1.99452 0.00744
HRGMv2_0159_13_105 vegan > omnivore 2.44577 0.00020
HRGMv2_0159_13_106 vegetarian > omnivore 2.00228 0.00744
HRGMv2_0159_13_106 vegan > omnivore 2.67285 0.00020
HRGMv2_0159_13_107 vegan > omnivore 2.02143 0.00020
HRGMv2_0159_13_107 vegetarian > omnivore 1.55966 0.00744
HRGMv2_0159_13_108 vegan > omnivore 2.50818 0.00020
HRGMv2_0159_13_108 vegetarian > omnivore 2.00172 0.00744
HRGMv2_0159_13_110 vegan > omnivore 1.92161 0.00020
HRGMv2_0159_13_110 vegetarian > omnivore 1.60777 0.00744
HRGMv2_0159_13_111 vegetarian > omnivore 2.27019 0.00744
HRGMv2_0159_13_111 vegan > omnivore 2.93344 0.00020
HRGMv2_0159_13_112 vegetarian > omnivore 1.31038 0.00744
HRGMv2_0159_13_112 vegan > omnivore 1.52486 0.00020

🧭 Explore Read Mapping of CGC

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