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Cluster: HRGMv2_0159_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0159_12 HRGMv2_0159_12_64 103182 104777 - GH30_4
CAZyme HRGMv2_0159_12 HRGMv2_0159_12_65 104858 105856 - GH43_34
pfam HRGMv2_0159_12 HRGMv2_0159_12_66 105934 106608 - DUF3823 | DUF3823_C
TC HRGMv2_0159_12 HRGMv2_0159_12_67 106622 108472 - 8.A.46.1.5
TC HRGMv2_0159_12 HRGMv2_0159_12_68 108487 111618 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0159_12 HRGMv2_0159_12_69 111705 111812 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0159_12 HRGMv2_0159_12_70 111809 115927 + HTH_AraC
CAZyme HRGMv2_0159_12 HRGMv2_0159_12_71 116263 117225 - GH18
Gene ID: HRGMv2_0159_12_64
Type: CAZyme
Location: 103182 - 104777 (-)
Gene ID: HRGMv2_0159_12_65
Type: CAZyme
Location: 104858 - 105856 (-)
Gene ID: HRGMv2_0159_12_66
Type: pfam
Location: 105934 - 106608 (-)
Gene ID: HRGMv2_0159_12_67
Type: TC
Location: 106622 - 108472 (-)
Gene ID: HRGMv2_0159_12_68
Type: TC
Location: 108487 - 111618 (-)
Gene ID: HRGMv2_0159_12_69
Type:
Location: 111705 - 111812 (+)
Gene ID: HRGMv2_0159_12_70
Type: TF
Location: 111809 - 115927 (+)
Gene ID: HRGMv2_0159_12_71
Type: CAZyme
Location: 116263 - 117225 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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