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Cluster: HRGMv2_0159_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_12 HRGMv2_0159_12_34 52748 55558 + 1.B.14.12.1
pfam HRGMv2_0159_12 HRGMv2_0159_12_35 55722 56660 + Metallophos
TC HRGMv2_0159_12 HRGMv2_0159_12_36 56866 58722 - 1.A.23.1.4
TC HRGMv2_0159_12 HRGMv2_0159_12_37 58850 59839 + 2.A.19.5.2
pfam HRGMv2_0159_12 HRGMv2_0159_12_38 59980 61713 - DUF4832 | DUF4874
CAZyme HRGMv2_0159_12 HRGMv2_0159_12_39 61770 63023 + GH154
pfam HRGMv2_0159_12 HRGMv2_0159_12_40 63239 64156 + Sulfatase | Phosphodiest | Metalloenzyme
NULL(UNKNOWN) HRGMv2_0159_12 HRGMv2_0159_12_41 65301 66725 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0159_12 HRGMv2_0159_12_42 66938 69991 + 1.B.14.6.1
TC HRGMv2_0159_12 HRGMv2_0159_12_43 70024 71772 + 8.A.46.1.6
CAZyme HRGMv2_0159_12 HRGMv2_0159_12_44 71799 73364 + GH30_6
NULL(UNKNOWN) HRGMv2_0159_12 HRGMv2_0159_12_45 73383 74810 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0159_12 HRGMv2_0159_12_46 74881 76077 + GH130_1
pfam HRGMv2_0159_12 HRGMv2_0159_12_47 76156 77367 - AAA_14 | DUF4143
TC HRGMv2_0159_12 HRGMv2_0159_12_48 77899 80964 + 1.B.14.6.1
pfam HRGMv2_0159_12 HRGMv2_0159_12_49 81004 82629 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0159_12 HRGMv2_0159_12_50 82664 84226 + GH30_6
NULL(UNKNOWN) HRGMv2_0159_12 HRGMv2_0159_12_51 84252 85430 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0159_12 HRGMv2_0159_12_52 85577 86746 + GH130_1
TC HRGMv2_0159_12 HRGMv2_0159_12_53 87068 88957 + 2.A.21.3.8
Gene ID: HRGMv2_0159_12_34
Type: TC
Location: 52748 - 55558 (+)
Gene ID: HRGMv2_0159_12_35
Type: pfam
Location: 55722 - 56660 (+)
Gene ID: HRGMv2_0159_12_36
Type: TC
Location: 56866 - 58722 (-)
Gene ID: HRGMv2_0159_12_37
Type: TC
Location: 58850 - 59839 (+)
Gene ID: HRGMv2_0159_12_38
Type: pfam
Location: 59980 - 61713 (-)
Gene ID: HRGMv2_0159_12_39
Type: CAZyme
Location: 61770 - 63023 (+)
Gene ID: HRGMv2_0159_12_40
Type: pfam
Location: 63239 - 64156 (+)
Gene ID: HRGMv2_0159_12_41
Type:
Location: 65301 - 66725 (+)
Gene ID: HRGMv2_0159_12_42
Type: TC
Location: 66938 - 69991 (+)
Gene ID: HRGMv2_0159_12_43
Type: TC
Location: 70024 - 71772 (+)
Gene ID: HRGMv2_0159_12_44
Type: CAZyme
Location: 71799 - 73364 (+)
Gene ID: HRGMv2_0159_12_45
Type:
Location: 73383 - 74810 (+)
Gene ID: HRGMv2_0159_12_46
Type: CAZyme
Location: 74881 - 76077 (+)
Gene ID: HRGMv2_0159_12_47
Type: pfam
Location: 76156 - 77367 (-)
Gene ID: HRGMv2_0159_12_48
Type: TC
Location: 77899 - 80964 (+)
Gene ID: HRGMv2_0159_12_49
Type: pfam
Location: 81004 - 82629 (+)
Gene ID: HRGMv2_0159_12_50
Type: CAZyme
Location: 82664 - 84226 (+)
Gene ID: HRGMv2_0159_12_51
Type:
Location: 84252 - 85430 (+)
Gene ID: HRGMv2_0159_12_52
Type: CAZyme
Location: 85577 - 86746 (+)
Gene ID: HRGMv2_0159_12_53
Type: TC
Location: 87068 - 88957 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0159_12_48 vegetarian > vegan 1.17082 0.02951

🧭 Explore Read Mapping of CGC

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