Cluster: HRGMv2_0159_CGC48
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_00740
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_100 | 115626 | 116732 | - | GH105 |
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_101 | 116755 | 117978 | - | GH154 |
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_102 | 117988 | 120549 | - | GH154 |
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_103 | 120556 | 122358 | - | CBM32 | GH43_28 |
| sulfatase | HRGMv2_0159_9 | HRGMv2_0159_9_104 | 122390 | 123775 | - | S1_9 |
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_105 | 123796 | 126180 | - | GH154 | GH88 |
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_106 | 126224 | 127771 | - | GH50 |
| pfam | HRGMv2_0159_9 | HRGMv2_0159_9_107 | 127793 | 129619 | - | BACON | BACON |
| pfam | HRGMv2_0159_9 | HRGMv2_0159_9_108 | 129664 | 131277 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0159_9 | HRGMv2_0159_9_109 | 131294 | 134353 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_110 | 134467 | 137487 | - | CBM96 |
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_111 | 137514 | 139772 | - | CE20 | CE20 |
| CAZyme | HRGMv2_0159_9 | HRGMv2_0159_9_112 | 139867 | 142734 | - | GH2 |
Gene ID: HRGMv2_0159_9_100
Type: CAZyme
Location: 115626 - 116732 (-)
Type: CAZyme
Location: 115626 - 116732 (-)
Gene ID: HRGMv2_0159_9_101
Type: CAZyme
Location: 116755 - 117978 (-)
Type: CAZyme
Location: 116755 - 117978 (-)
Gene ID: HRGMv2_0159_9_102
Type: CAZyme
Location: 117988 - 120549 (-)
Type: CAZyme
Location: 117988 - 120549 (-)
Gene ID: HRGMv2_0159_9_103
Type: CAZyme
Location: 120556 - 122358 (-)
Type: CAZyme
Location: 120556 - 122358 (-)
Gene ID: HRGMv2_0159_9_104
Type: sulfatase
Location: 122390 - 123775 (-)
Type: sulfatase
Location: 122390 - 123775 (-)
Gene ID: HRGMv2_0159_9_105
Type: CAZyme
Location: 123796 - 126180 (-)
Type: CAZyme
Location: 123796 - 126180 (-)
Gene ID: HRGMv2_0159_9_106
Type: CAZyme
Location: 126224 - 127771 (-)
Type: CAZyme
Location: 126224 - 127771 (-)
Gene ID: HRGMv2_0159_9_107
Type: pfam
Location: 127793 - 129619 (-)
Type: pfam
Location: 127793 - 129619 (-)
Gene ID: HRGMv2_0159_9_108
Type: pfam
Location: 129664 - 131277 (-)
Type: pfam
Location: 129664 - 131277 (-)
Gene ID: HRGMv2_0159_9_109
Type: TC
Location: 131294 - 134353 (-)
Type: TC
Location: 131294 - 134353 (-)
Gene ID: HRGMv2_0159_9_110
Type: CAZyme
Location: 134467 - 137487 (-)
Type: CAZyme
Location: 134467 - 137487 (-)
Gene ID: HRGMv2_0159_9_111
Type: CAZyme
Location: 137514 - 139772 (-)
Type: CAZyme
Location: 137514 - 139772 (-)
Gene ID: HRGMv2_0159_9_112
Type: CAZyme
Location: 139867 - 142734 (-)
Type: CAZyme
Location: 139867 - 142734 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0159_9_101 | vegan > omnivore | 1.60463 | 0.00020 |