Cluster: HRGMv2_0159_CGC41
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_02823
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_7 | HRGMv2_0159_7_151 | 235331 | 239032 | + | GH2 |
| CAZyme | HRGMv2_0159_7 | HRGMv2_0159_7_152 | 239287 | 241866 | - | GH95 |
| CAZyme | HRGMv2_0159_7 | HRGMv2_0159_7_153 | 241955 | 244507 | - | GH3 |
| CAZyme | HRGMv2_0159_7 | HRGMv2_0159_7_154 | 244581 | 247481 | - | GH2 |
| CAZyme | HRGMv2_0159_7 | HRGMv2_0159_7_155 | 247530 | 249227 | - | CBM32 | GH43_28 |
| CAZyme | HRGMv2_0159_7 | HRGMv2_0159_7_156 | 249321 | 252185 | - | GH3 |
| CAZyme | HRGMv2_0159_7 | HRGMv2_0159_7_157 | 252218 | 254434 | - | GH3 |
| CAZyme | HRGMv2_0159_7 | HRGMv2_0159_7_158 | 254484 | 256595 | - | GH43_2 | GH43_2 |
| pfam | HRGMv2_0159_7 | HRGMv2_0159_7_159 | 256850 | 257872 | + | WYL |
| pfam | HRGMv2_0159_7 | HRGMv2_0159_7_160 | 257958 | 258803 | - | Patatin | DUF6363 |
| TC | HRGMv2_0159_7 | HRGMv2_0159_7_161 | 258784 | 261006 | - | 2.A.37.4.2 |
Gene ID: HRGMv2_0159_7_151
Type: CAZyme
Location: 235331 - 239032 (+)
Type: CAZyme
Location: 235331 - 239032 (+)
Gene ID: HRGMv2_0159_7_152
Type: CAZyme
Location: 239287 - 241866 (-)
Type: CAZyme
Location: 239287 - 241866 (-)
Gene ID: HRGMv2_0159_7_153
Type: CAZyme
Location: 241955 - 244507 (-)
Type: CAZyme
Location: 241955 - 244507 (-)
Gene ID: HRGMv2_0159_7_154
Type: CAZyme
Location: 244581 - 247481 (-)
Type: CAZyme
Location: 244581 - 247481 (-)
Gene ID: HRGMv2_0159_7_155
Type: CAZyme
Location: 247530 - 249227 (-)
Type: CAZyme
Location: 247530 - 249227 (-)
Gene ID: HRGMv2_0159_7_156
Type: CAZyme
Location: 249321 - 252185 (-)
Type: CAZyme
Location: 249321 - 252185 (-)
Gene ID: HRGMv2_0159_7_157
Type: CAZyme
Location: 252218 - 254434 (-)
Type: CAZyme
Location: 252218 - 254434 (-)
Gene ID: HRGMv2_0159_7_158
Type: CAZyme
Location: 254484 - 256595 (-)
Type: CAZyme
Location: 254484 - 256595 (-)
Gene ID: HRGMv2_0159_7_159
Type: pfam
Location: 256850 - 257872 (+)
Type: pfam
Location: 256850 - 257872 (+)
Gene ID: HRGMv2_0159_7_160
Type: pfam
Location: 257958 - 258803 (-)
Type: pfam
Location: 257958 - 258803 (-)
Gene ID: HRGMv2_0159_7_161
Type: TC
Location: 258784 - 261006 (-)
Type: TC
Location: 258784 - 261006 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0159_7_151 | vegan > omnivore | 2.23544 | 0.00020 |
| HRGMv2_0159_7_151 | vegetarian > omnivore | 1.26242 | 0.00744 |