dbCAN Logo

Cluster: HRGMv2_0159_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_7 HRGMv2_0159_7_126 184249 185121 - 3.A.1.12.12
TC HRGMv2_0159_7 HRGMv2_0159_7_127 185138 185962 - 3.A.1.12.1
TC HRGMv2_0159_7 HRGMv2_0159_7_128 185959 187185 - 3.A.1.12.9
pfam HRGMv2_0159_7 HRGMv2_0159_7_129 187484 187822 - DNA_binding_1
TF HRGMv2_0159_7 HRGMv2_0159_7_130 187999 190842 - HTH_AraC
TC HRGMv2_0159_7 HRGMv2_0159_7_131 190839 196397 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0159_7 HRGMv2_0159_7_132 196745 197863 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0159_7 HRGMv2_0159_7_133 198073 198960 - PfkB
TC HRGMv2_0159_7 HRGMv2_0159_7_134 198996 200162 - 2.A.1.7.17
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_135 200506 202362 - GH32
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_136 202463 204031 - GH32
pfam HRGMv2_0159_7 HRGMv2_0159_7_137 204049 205434 - DUF4960
pfam HRGMv2_0159_7 HRGMv2_0159_7_138 205461 207173 - SusD_RagB | SusD-like_3
TC HRGMv2_0159_7 HRGMv2_0159_7_139 207201 210314 - 1.B.14.6.1
pfam HRGMv2_0159_7 HRGMv2_0159_7_140 210605 211477 + Bro-N
pfam HRGMv2_0159_7 HRGMv2_0159_7_141 211506 212378 + Aldose_epim
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_142 212550 214412 - GH32
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_143 214773 218015 + GH2
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_144 218062 220323 + GH92
pfam HRGMv2_0159_7 HRGMv2_0159_7_145 220522 223104 + Kelch_KLHDC2_KLHL20_DRC7
TC HRGMv2_0159_7 HRGMv2_0159_7_146 223557 226835 + 1.B.14.6.2
TC HRGMv2_0159_7 HRGMv2_0159_7_147 226847 228835 + 8.A.46.2.2
Gene ID: HRGMv2_0159_7_126
Type: TC
Location: 184249 - 185121 (-)
Gene ID: HRGMv2_0159_7_127
Type: TC
Location: 185138 - 185962 (-)
Gene ID: HRGMv2_0159_7_128
Type: TC
Location: 185959 - 187185 (-)
Gene ID: HRGMv2_0159_7_129
Type: pfam
Location: 187484 - 187822 (-)
Gene ID: HRGMv2_0159_7_130
Type: TF
Location: 187999 - 190842 (-)
Gene ID: HRGMv2_0159_7_131
Type: TC
Location: 190839 - 196397 (-)
Gene ID: HRGMv2_0159_7_132
Type:
Location: 196745 - 197863 (-)
Gene ID: HRGMv2_0159_7_133
Type: STP
Location: 198073 - 198960 (-)
Gene ID: HRGMv2_0159_7_134
Type: TC
Location: 198996 - 200162 (-)
Gene ID: HRGMv2_0159_7_135
Type: CAZyme
Location: 200506 - 202362 (-)
Gene ID: HRGMv2_0159_7_136
Type: CAZyme
Location: 202463 - 204031 (-)
Gene ID: HRGMv2_0159_7_137
Type: pfam
Location: 204049 - 205434 (-)
Gene ID: HRGMv2_0159_7_138
Type: pfam
Location: 205461 - 207173 (-)
Gene ID: HRGMv2_0159_7_139
Type: TC
Location: 207201 - 210314 (-)
Gene ID: HRGMv2_0159_7_140
Type: pfam
Location: 210605 - 211477 (+)
Gene ID: HRGMv2_0159_7_141
Type: pfam
Location: 211506 - 212378 (+)
Gene ID: HRGMv2_0159_7_142
Type: CAZyme
Location: 212550 - 214412 (-)
Gene ID: HRGMv2_0159_7_143
Type: CAZyme
Location: 214773 - 218015 (+)
Gene ID: HRGMv2_0159_7_144
Type: CAZyme
Location: 218062 - 220323 (+)
Gene ID: HRGMv2_0159_7_145
Type: pfam
Location: 220522 - 223104 (+)
Gene ID: HRGMv2_0159_7_146
Type: TC
Location: 223557 - 226835 (+)
Gene ID: HRGMv2_0159_7_147
Type: TC
Location: 226847 - 228835 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0159_7_132 vegan > omnivore 2.37254 0.00020
HRGMv2_0159_7_132 vegetarian > omnivore 2.04591 0.00744
HRGMv2_0159_7_140 vegan > omnivore 2.55022 0.00020
HRGMv2_0159_7_140 vegetarian > omnivore 1.08885 0.00744
HRGMv2_0159_7_141 vegan > omnivore 1.05296 0.00020

🧭 Explore Read Mapping of CGC

← Back to Cluster List