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Cluster: HRGMv2_0159_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_7 HRGMv2_0159_7_1 63 1238 - 1.A.23.4.5
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_2 1378 3195 - GH29
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_3 3340 6420 - GH2
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_4 6460 8790 - GH20
sulfatase HRGMv2_0159_7 HRGMv2_0159_7_5 8806 10389 - S1_11
pfam HRGMv2_0159_7 HRGMv2_0159_7_6 10630 11982 - DUF4988
CAZyme HRGMv2_0159_7 HRGMv2_0159_7_7 12021 13949 - GH16_3
TC HRGMv2_0159_7 HRGMv2_0159_7_8 13987 15792 - 8.A.46.1.3
TC HRGMv2_0159_7 HRGMv2_0159_7_9 15809 19123 - 1.B.14.6.1
Gene ID: HRGMv2_0159_7_1
Type: TC
Location: 63 - 1238 (-)
Gene ID: HRGMv2_0159_7_2
Type: CAZyme
Location: 1378 - 3195 (-)
Gene ID: HRGMv2_0159_7_3
Type: CAZyme
Location: 3340 - 6420 (-)
Gene ID: HRGMv2_0159_7_4
Type: CAZyme
Location: 6460 - 8790 (-)
Gene ID: HRGMv2_0159_7_5
Type: sulfatase
Location: 8806 - 10389 (-)
Gene ID: HRGMv2_0159_7_6
Type: pfam
Location: 10630 - 11982 (-)
Gene ID: HRGMv2_0159_7_7
Type: CAZyme
Location: 12021 - 13949 (-)
Gene ID: HRGMv2_0159_7_8
Type: TC
Location: 13987 - 15792 (-)
Gene ID: HRGMv2_0159_7_9
Type: TC
Location: 15809 - 19123 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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