Cluster: HRGMv2_0159_CGC36
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_01105
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_6 | HRGMv2_0159_6_153 | 205484 | 208591 | + | GH2 |
| TC | HRGMv2_0159_6 | HRGMv2_0159_6_154 | 208773 | 209948 | + | 8.A.1.6.3 |
| TC | HRGMv2_0159_6 | HRGMv2_0159_6_155 | 209965 | 213396 | + | 2.A.6.2.22 |
| TC | HRGMv2_0159_6 | HRGMv2_0159_6_156 | 213408 | 214799 | + | 2.A.6.2.25 |
| pfam | HRGMv2_0159_6 | HRGMv2_0159_6_157 | 214818 | 215588 | + | Hexapep | Hexapep | Acetyltransf_11 |
| CAZyme | HRGMv2_0159_6 | HRGMv2_0159_6_158 | 215677 | 217377 | - | GH93 |
| pfam | HRGMv2_0159_6 | HRGMv2_0159_6_159 | 217480 | 219354 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0159_6 | HRGMv2_0159_6_160 | 219363 | 222437 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0159_6 | HRGMv2_0159_6_161 | 222487 | 223473 | - | GH43_31 |
| pfam | HRGMv2_0159_6 | HRGMv2_0159_6_162 | 223518 | 224876 | - | TIG | SGL |
| CAZyme | HRGMv2_0159_6 | HRGMv2_0159_6_163 | 225092 | 226909 | - | GH2 |
Gene ID: HRGMv2_0159_6_153
Type: CAZyme
Location: 205484 - 208591 (+)
Type: CAZyme
Location: 205484 - 208591 (+)
Gene ID: HRGMv2_0159_6_154
Type: TC
Location: 208773 - 209948 (+)
Type: TC
Location: 208773 - 209948 (+)
Gene ID: HRGMv2_0159_6_155
Type: TC
Location: 209965 - 213396 (+)
Type: TC
Location: 209965 - 213396 (+)
Gene ID: HRGMv2_0159_6_156
Type: TC
Location: 213408 - 214799 (+)
Type: TC
Location: 213408 - 214799 (+)
Gene ID: HRGMv2_0159_6_157
Type: pfam
Location: 214818 - 215588 (+)
Type: pfam
Location: 214818 - 215588 (+)
Gene ID: HRGMv2_0159_6_158
Type: CAZyme
Location: 215677 - 217377 (-)
Type: CAZyme
Location: 215677 - 217377 (-)
Gene ID: HRGMv2_0159_6_159
Type: pfam
Location: 217480 - 219354 (-)
Type: pfam
Location: 217480 - 219354 (-)
Gene ID: HRGMv2_0159_6_160
Type: TC
Location: 219363 - 222437 (-)
Type: TC
Location: 219363 - 222437 (-)
Gene ID: HRGMv2_0159_6_161
Type: CAZyme
Location: 222487 - 223473 (-)
Type: CAZyme
Location: 222487 - 223473 (-)
Gene ID: HRGMv2_0159_6_162
Type: pfam
Location: 223518 - 224876 (-)
Type: pfam
Location: 223518 - 224876 (-)
Gene ID: HRGMv2_0159_6_163
Type: CAZyme
Location: 225092 - 226909 (-)
Type: CAZyme
Location: 225092 - 226909 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.