Cluster: HRGMv2_0159_CGC30
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0159_5 | HRGMv2_0159_5_252 | 274565 | 275359 | - | 3.A.1.11.8 |
| TC | HRGMv2_0159_5 | HRGMv2_0159_5_253 | 275353 | 276153 | - | 3.A.1.11.8 |
| TC | HRGMv2_0159_5 | HRGMv2_0159_5_254 | 276165 | 277550 | - | 3.A.1.11.8 |
| pfam | HRGMv2_0159_5 | HRGMv2_0159_5_255 | 277695 | 278798 | + | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369 |
| CAZyme | HRGMv2_0159_5 | HRGMv2_0159_5_256 | 279076 | 281640 | - | GT35 |
| CAZyme | HRGMv2_0159_5 | HRGMv2_0159_5_257 | 281678 | 283339 | - | GT3 |
| TC | HRGMv2_0159_5 | HRGMv2_0159_5_258 | 283542 | 284006 | - | 3.A.2.2.2 |
| TC | HRGMv2_0159_5 | HRGMv2_0159_5_259 | 284082 | 285899 | - | 3.A.2.2.2 |
| pfam | HRGMv2_0159_5 | HRGMv2_0159_5_260 | 285896 | 286501 | - | ATP-synt_D |
| TC | HRGMv2_0159_5 | HRGMv2_0159_5_261 | 286610 | 287938 | - | 3.A.2.3.3 |
| TC | HRGMv2_0159_5 | HRGMv2_0159_5_262 | 287970 | 289730 | - | 3.A.2.3.3 |
Gene ID: HRGMv2_0159_5_252
Type: TC
Location: 274565 - 275359 (-)
Type: TC
Location: 274565 - 275359 (-)
Gene ID: HRGMv2_0159_5_253
Type: TC
Location: 275353 - 276153 (-)
Type: TC
Location: 275353 - 276153 (-)
Gene ID: HRGMv2_0159_5_254
Type: TC
Location: 276165 - 277550 (-)
Type: TC
Location: 276165 - 277550 (-)
Gene ID: HRGMv2_0159_5_255
Type: pfam
Location: 277695 - 278798 (+)
Type: pfam
Location: 277695 - 278798 (+)
Gene ID: HRGMv2_0159_5_256
Type: CAZyme
Location: 279076 - 281640 (-)
Type: CAZyme
Location: 279076 - 281640 (-)
Gene ID: HRGMv2_0159_5_257
Type: CAZyme
Location: 281678 - 283339 (-)
Type: CAZyme
Location: 281678 - 283339 (-)
Gene ID: HRGMv2_0159_5_258
Type: TC
Location: 283542 - 284006 (-)
Type: TC
Location: 283542 - 284006 (-)
Gene ID: HRGMv2_0159_5_259
Type: TC
Location: 284082 - 285899 (-)
Type: TC
Location: 284082 - 285899 (-)
Gene ID: HRGMv2_0159_5_260
Type: pfam
Location: 285896 - 286501 (-)
Type: pfam
Location: 285896 - 286501 (-)
Gene ID: HRGMv2_0159_5_261
Type: TC
Location: 286610 - 287938 (-)
Type: TC
Location: 286610 - 287938 (-)
Gene ID: HRGMv2_0159_5_262
Type: TC
Location: 287970 - 289730 (-)
Type: TC
Location: 287970 - 289730 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.