dbCAN Logo

Cluster: HRGMv2_0159_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_5 HRGMv2_0159_5_185 203083 204402 + 1.B.3.1.7
peptidase HRGMv2_0159_5 HRGMv2_0159_5_186 204442 205617 + M75.UPW
pfam HRGMv2_0159_5 HRGMv2_0159_5_187 205714 207354 + DHOR
TC HRGMv2_0159_5 HRGMv2_0159_5_188 207433 209676 + 9.B.14.3.1
NULL(UNKNOWN) HRGMv2_0159_5 HRGMv2_0159_5_189 210458 210913 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0159_5 HRGMv2_0159_5_190 210910 212010 + Radical_SAM | SPASM
CAZyme HRGMv2_0159_5 HRGMv2_0159_5_191 212722 215028 - GH20
TC HRGMv2_0159_5 HRGMv2_0159_5_192 215218 216132 + 2.A.4.7.6
Gene ID: HRGMv2_0159_5_185
Type: TC
Location: 203083 - 204402 (+)
Gene ID: HRGMv2_0159_5_186
Type: peptidase
Location: 204442 - 205617 (+)
Gene ID: HRGMv2_0159_5_187
Type: pfam
Location: 205714 - 207354 (+)
Gene ID: HRGMv2_0159_5_188
Type: TC
Location: 207433 - 209676 (+)
Gene ID: HRGMv2_0159_5_189
Type:
Location: 210458 - 210913 (+)
Gene ID: HRGMv2_0159_5_190
Type: pfam
Location: 210910 - 212010 (+)
Gene ID: HRGMv2_0159_5_191
Type: CAZyme
Location: 212722 - 215028 (-)
Gene ID: HRGMv2_0159_5_192
Type: TC
Location: 215218 - 216132 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0159_5_190 vegetarian > vegan 1.61754 0.03545

🧭 Explore Read Mapping of CGC

← Back to Cluster List