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Cluster: HRGMv2_0159_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0159_4 HRGMv2_0159_4_221 281767 284196 + GH20
STP HRGMv2_0159_4 HRGMv2_0159_4_222 284378 284908 - Sigma70_r2 | Sigma70_r4_2
pfam HRGMv2_0159_4 HRGMv2_0159_4_223 285065 286207 - BT_3987-like_N | Laminin_G_3
CAZyme HRGMv2_0159_4 HRGMv2_0159_4_224 286243 287394 - GH18
TC HRGMv2_0159_4 HRGMv2_0159_4_225 287424 288989 - 8.A.46.2.1
TC HRGMv2_0159_4 HRGMv2_0159_4_226 289005 292085 - 1.B.14.6.13
STP HRGMv2_0159_4 HRGMv2_0159_4_227 292827 293777 - Pyr_redox_2
pfam HRGMv2_0159_4 HRGMv2_0159_4_228 293814 294461 - LolA_2
TC HRGMv2_0159_4 HRGMv2_0159_4_229 294481 296973 - 3.A.12.1.1
Gene ID: HRGMv2_0159_4_221
Type: CAZyme
Location: 281767 - 284196 (+)
Gene ID: HRGMv2_0159_4_222
Type: STP
Location: 284378 - 284908 (-)
Gene ID: HRGMv2_0159_4_223
Type: pfam
Location: 285065 - 286207 (-)
Gene ID: HRGMv2_0159_4_224
Type: CAZyme
Location: 286243 - 287394 (-)
Gene ID: HRGMv2_0159_4_225
Type: TC
Location: 287424 - 288989 (-)
Gene ID: HRGMv2_0159_4_226
Type: TC
Location: 289005 - 292085 (-)
Gene ID: HRGMv2_0159_4_227
Type: STP
Location: 292827 - 293777 (-)
Gene ID: HRGMv2_0159_4_228
Type: pfam
Location: 293814 - 294461 (-)
Gene ID: HRGMv2_0159_4_229
Type: TC
Location: 294481 - 296973 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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