Cluster: HRGMv2_0159_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0159_4 | HRGMv2_0159_4_182 | 219928 | 223317 | - | 1.B.14.6.1 |
| STP | HRGMv2_0159_4 | HRGMv2_0159_4_183 | 223485 | 224507 | - | FecR |
| TF | HRGMv2_0159_4 | HRGMv2_0159_4_184 | 224641 | 225216 | + | GerE |
| CAZyme | HRGMv2_0159_4 | HRGMv2_0159_4_185 | 225448 | 227232 | - | GH123 |
| TC | HRGMv2_0159_4 | HRGMv2_0159_4_186 | 227252 | 228496 | - | 2.A.1.14.14 |
| CAZyme | HRGMv2_0159_4 | HRGMv2_0159_4_187 | 228523 | 230595 | - | CE20 |
| sulfatase | HRGMv2_0159_4 | HRGMv2_0159_4_188 | 230622 | 231725 | - | S1_15 |
| TC | HRGMv2_0159_4 | HRGMv2_0159_4_189 | 231824 | 233371 | - | 8.A.46.1.4 |
| TC | HRGMv2_0159_4 | HRGMv2_0159_4_190 | 233403 | 236669 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0159_4 | HRGMv2_0159_4_191 | 236916 | 237821 | - | DHDPS |
| TF | HRGMv2_0159_4 | HRGMv2_0159_4_192 | 237842 | 238570 | - | GntR |
| TC | HRGMv2_0159_4 | HRGMv2_0159_4_193 | 239019 | 240914 | - | 2.A.21.9.2 |
Gene ID: HRGMv2_0159_4_182
Type: TC
Location: 219928 - 223317 (-)
Type: TC
Location: 219928 - 223317 (-)
Gene ID: HRGMv2_0159_4_183
Type: STP
Location: 223485 - 224507 (-)
Type: STP
Location: 223485 - 224507 (-)
Gene ID: HRGMv2_0159_4_184
Type: TF
Location: 224641 - 225216 (+)
Type: TF
Location: 224641 - 225216 (+)
Gene ID: HRGMv2_0159_4_185
Type: CAZyme
Location: 225448 - 227232 (-)
Type: CAZyme
Location: 225448 - 227232 (-)
Gene ID: HRGMv2_0159_4_186
Type: TC
Location: 227252 - 228496 (-)
Type: TC
Location: 227252 - 228496 (-)
Gene ID: HRGMv2_0159_4_187
Type: CAZyme
Location: 228523 - 230595 (-)
Type: CAZyme
Location: 228523 - 230595 (-)
Gene ID: HRGMv2_0159_4_188
Type: sulfatase
Location: 230622 - 231725 (-)
Type: sulfatase
Location: 230622 - 231725 (-)
Gene ID: HRGMv2_0159_4_189
Type: TC
Location: 231824 - 233371 (-)
Type: TC
Location: 231824 - 233371 (-)
Gene ID: HRGMv2_0159_4_190
Type: TC
Location: 233403 - 236669 (-)
Type: TC
Location: 233403 - 236669 (-)
Gene ID: HRGMv2_0159_4_191
Type: pfam
Location: 236916 - 237821 (-)
Type: pfam
Location: 236916 - 237821 (-)
Gene ID: HRGMv2_0159_4_192
Type: TF
Location: 237842 - 238570 (-)
Type: TF
Location: 237842 - 238570 (-)
Gene ID: HRGMv2_0159_4_193
Type: TC
Location: 239019 - 240914 (-)
Type: TC
Location: 239019 - 240914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.