Cluster: HRGMv2_0159_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_04312
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_3 | HRGMv2_0159_3_65 | 98298 | 100733 | + | GH127 |
| pfam | HRGMv2_0159_3 | HRGMv2_0159_3_66 | 100806 | 101405 | - | Bac_DNA_binding | HU-HIG |
| NULL(UNKNOWN) | HRGMv2_0159_3 | HRGMv2_0159_3_67 | 101600 | 101740 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0159_3 | HRGMv2_0159_3_68 | 101824 | 105243 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0159_3 | HRGMv2_0159_3_69 | 105264 | 106997 | + | SusD_RagB | SusD-like_3 |
| sulfatase | HRGMv2_0159_3 | HRGMv2_0159_3_70 | 107017 | 107808 | + | S1_15 |
| CAZyme | HRGMv2_0159_3 | HRGMv2_0159_3_71 | 107837 | 109993 | + | GH89 |
| pfam | HRGMv2_0159_3 | HRGMv2_0159_3_72 | 110002 | 111144 | + | Gly_kinase |
| TC | HRGMv2_0159_3 | HRGMv2_0159_3_73 | 111151 | 112407 | + | 2.A.8.1.9 |
| NULL(UNKNOWN) | HRGMv2_0159_3 | HRGMv2_0159_3_74 | 112422 | 113507 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0159_3 | HRGMv2_0159_3_75 | 113514 | 115697 | + | GH89 |
Gene ID: HRGMv2_0159_3_65
Type: CAZyme
Location: 98298 - 100733 (+)
Type: CAZyme
Location: 98298 - 100733 (+)
Gene ID: HRGMv2_0159_3_66
Type: pfam
Location: 100806 - 101405 (-)
Type: pfam
Location: 100806 - 101405 (-)
Gene ID: HRGMv2_0159_3_67
Type:
Location: 101600 - 101740 (-)
Type:
Location: 101600 - 101740 (-)
Gene ID: HRGMv2_0159_3_68
Type: TC
Location: 101824 - 105243 (+)
Type: TC
Location: 101824 - 105243 (+)
Gene ID: HRGMv2_0159_3_69
Type: pfam
Location: 105264 - 106997 (+)
Type: pfam
Location: 105264 - 106997 (+)
Gene ID: HRGMv2_0159_3_70
Type: sulfatase
Location: 107017 - 107808 (+)
Type: sulfatase
Location: 107017 - 107808 (+)
Gene ID: HRGMv2_0159_3_71
Type: CAZyme
Location: 107837 - 109993 (+)
Type: CAZyme
Location: 107837 - 109993 (+)
Gene ID: HRGMv2_0159_3_72
Type: pfam
Location: 110002 - 111144 (+)
Type: pfam
Location: 110002 - 111144 (+)
Gene ID: HRGMv2_0159_3_73
Type: TC
Location: 111151 - 112407 (+)
Type: TC
Location: 111151 - 112407 (+)
Gene ID: HRGMv2_0159_3_74
Type:
Location: 112422 - 113507 (+)
Type:
Location: 112422 - 113507 (+)
Gene ID: HRGMv2_0159_3_75
Type: CAZyme
Location: 113514 - 115697 (+)
Type: CAZyme
Location: 113514 - 115697 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0159_3_66 | vegan > omnivore | 2.15088 | 0.00020 |
| HRGMv2_0159_3_66 | vegetarian > omnivore | 1.04683 | 0.00744 |