Cluster: HRGMv2_0159_CGC118
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_34 | HRGMv2_0159_34_39 | 40794 | 42053 | + | GH109 |
| CAZyme | HRGMv2_0159_34 | HRGMv2_0159_34_40 | 42355 | 43764 | + | GH109 |
| TC | HRGMv2_0159_34 | HRGMv2_0159_34_41 | 43879 | 44769 | + | 2.A.115.1.1 |
| CAZyme | HRGMv2_0159_34 | HRGMv2_0159_34_42 | 44842 | 48183 | + | GH2 |
| pfam | HRGMv2_0159_34 | HRGMv2_0159_34_43 | 48214 | 49302 | + | APH |
| pfam | HRGMv2_0159_34 | HRGMv2_0159_34_44 | 49473 | 50123 | - | DUF3256 |
| TC | HRGMv2_0159_34 | HRGMv2_0159_34_45 | 50169 | 51071 | - | 2.A.7.3.57 |
Gene ID: HRGMv2_0159_34_39
Type: CAZyme
Location: 40794 - 42053 (+)
Type: CAZyme
Location: 40794 - 42053 (+)
Gene ID: HRGMv2_0159_34_40
Type: CAZyme
Location: 42355 - 43764 (+)
Type: CAZyme
Location: 42355 - 43764 (+)
Gene ID: HRGMv2_0159_34_41
Type: TC
Location: 43879 - 44769 (+)
Type: TC
Location: 43879 - 44769 (+)
Gene ID: HRGMv2_0159_34_42
Type: CAZyme
Location: 44842 - 48183 (+)
Type: CAZyme
Location: 44842 - 48183 (+)
Gene ID: HRGMv2_0159_34_43
Type: pfam
Location: 48214 - 49302 (+)
Type: pfam
Location: 48214 - 49302 (+)
Gene ID: HRGMv2_0159_34_44
Type: pfam
Location: 49473 - 50123 (-)
Type: pfam
Location: 49473 - 50123 (-)
Gene ID: HRGMv2_0159_34_45
Type: TC
Location: 50169 - 51071 (-)
Type: TC
Location: 50169 - 51071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.