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Cluster: HRGMv2_0159_CGC114

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_30 HRGMv2_0159_30_16 23877 25886 - 1.B.14.6.8
pfam HRGMv2_0159_30 HRGMv2_0159_30_17 25962 26507 - DUF3575
CAZyme HRGMv2_0159_30 HRGMv2_0159_30_18 26688 29456 - PL40
TC HRGMv2_0159_30 HRGMv2_0159_30_19 29546 31525 + 3.D.1.5.1
STP HRGMv2_0159_30 HRGMv2_0159_30_20 31537 33303 + Fer4
TC HRGMv2_0159_30 HRGMv2_0159_30_21 33322 33798 + 3.D.1.5.1
STP HRGMv2_0159_30 HRGMv2_0159_30_22 33873 35780 - HATPase_c | HisKA | PAS | Response_reg
pfam HRGMv2_0159_30 HRGMv2_0159_30_23 35865 37823 - DUF4114 | DUF4842
TC HRGMv2_0159_30 HRGMv2_0159_30_24 38147 40204 - 2.A.21.9.2
TC HRGMv2_0159_30 HRGMv2_0159_30_25 40726 43845 + 2.A.21.9.2
Gene ID: HRGMv2_0159_30_16
Type: TC
Location: 23877 - 25886 (-)
Gene ID: HRGMv2_0159_30_17
Type: pfam
Location: 25962 - 26507 (-)
Gene ID: HRGMv2_0159_30_18
Type: CAZyme
Location: 26688 - 29456 (-)
Gene ID: HRGMv2_0159_30_19
Type: TC
Location: 29546 - 31525 (+)
Gene ID: HRGMv2_0159_30_20
Type: STP
Location: 31537 - 33303 (+)
Gene ID: HRGMv2_0159_30_21
Type: TC
Location: 33322 - 33798 (+)
Gene ID: HRGMv2_0159_30_22
Type: STP
Location: 33873 - 35780 (-)
Gene ID: HRGMv2_0159_30_23
Type: pfam
Location: 35865 - 37823 (-)
Gene ID: HRGMv2_0159_30_24
Type: TC
Location: 38147 - 40204 (-)
Gene ID: HRGMv2_0159_30_25
Type: TC
Location: 40726 - 43845 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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