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Cluster: HRGMv2_0159_CGC113

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_29 HRGMv2_0159_29_14 21046 24141 + 1.B.14.6.1
CAZyme HRGMv2_0159_29 HRGMv2_0159_29_15 24849 26993 - GH31_1
CAZyme HRGMv2_0159_29 HRGMv2_0159_29_16 27677 30352 - CBM67 | GH78
pfam HRGMv2_0159_29 HRGMv2_0159_29_17 30371 31777 - Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_0159_29 HRGMv2_0159_29_18 31823 34915 - CBM32 | GH2
CAZyme HRGMv2_0159_29 HRGMv2_0159_29_19 34964 37303 - GH92
CAZyme HRGMv2_0159_29 HRGMv2_0159_29_20 37322 39889 - GH38
Gene ID: HRGMv2_0159_29_14
Type: TC
Location: 21046 - 24141 (+)
Gene ID: HRGMv2_0159_29_15
Type: CAZyme
Location: 24849 - 26993 (-)
Gene ID: HRGMv2_0159_29_16
Type: CAZyme
Location: 27677 - 30352 (-)
Gene ID: HRGMv2_0159_29_17
Type: pfam
Location: 30371 - 31777 (-)
Gene ID: HRGMv2_0159_29_18
Type: CAZyme
Location: 31823 - 34915 (-)
Gene ID: HRGMv2_0159_29_19
Type: CAZyme
Location: 34964 - 37303 (-)
Gene ID: HRGMv2_0159_29_20
Type: CAZyme
Location: 37322 - 39889 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0159_29_18 vegan > omnivore 1.11408 0.00020

🧭 Explore Read Mapping of CGC

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