Cluster: HRGMv2_0159_CGC109
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0159
- CGC Family ID: CGCFAM_00982
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0159_25 | HRGMv2_0159_25_65 | 112095 | 113843 | - | CE12 | CE8 |
| CAZyme | HRGMv2_0159_25 | HRGMv2_0159_25_66 | 114225 | 115169 | - | CE8 |
| CAZyme | HRGMv2_0159_25 | HRGMv2_0159_25_67 | 115206 | 116405 | - | GH105 |
| TC | HRGMv2_0159_25 | HRGMv2_0159_25_68 | 116707 | 118113 | + | 4.A.5.1.4 |
| pfam | HRGMv2_0159_25 | HRGMv2_0159_25_69 | 118180 | 119100 | + | KduI |
| NULL(UNKNOWN) | HRGMv2_0159_25 | HRGMv2_0159_25_70 | 119161 | 119283 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0159_25 | HRGMv2_0159_25_71 | 119367 | 120884 | + | 2.A.1.14.25 |
| NULL(UNKNOWN) | HRGMv2_0159_25 | HRGMv2_0159_25_72 | 120980 | 121108 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0159_25 | HRGMv2_0159_25_73 | 121286 | 124807 | - | DEAD | ResIII | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30 |
| TC | HRGMv2_0159_25 | HRGMv2_0159_25_74 | 124770 | 125606 | - | 2.A.64.1.2 |
Gene ID: HRGMv2_0159_25_65
Type: CAZyme
Location: 112095 - 113843 (-)
Type: CAZyme
Location: 112095 - 113843 (-)
Gene ID: HRGMv2_0159_25_66
Type: CAZyme
Location: 114225 - 115169 (-)
Type: CAZyme
Location: 114225 - 115169 (-)
Gene ID: HRGMv2_0159_25_67
Type: CAZyme
Location: 115206 - 116405 (-)
Type: CAZyme
Location: 115206 - 116405 (-)
Gene ID: HRGMv2_0159_25_68
Type: TC
Location: 116707 - 118113 (+)
Type: TC
Location: 116707 - 118113 (+)
Gene ID: HRGMv2_0159_25_69
Type: pfam
Location: 118180 - 119100 (+)
Type: pfam
Location: 118180 - 119100 (+)
Gene ID: HRGMv2_0159_25_70
Type:
Location: 119161 - 119283 (-)
Type:
Location: 119161 - 119283 (-)
Gene ID: HRGMv2_0159_25_71
Type: TC
Location: 119367 - 120884 (+)
Type: TC
Location: 119367 - 120884 (+)
Gene ID: HRGMv2_0159_25_72
Type:
Location: 120980 - 121108 (+)
Type:
Location: 120980 - 121108 (+)
Gene ID: HRGMv2_0159_25_73
Type: pfam
Location: 121286 - 124807 (-)
Type: pfam
Location: 121286 - 124807 (-)
Gene ID: HRGMv2_0159_25_74
Type: TC
Location: 124770 - 125606 (-)
Type: TC
Location: 124770 - 125606 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.