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Cluster: HRGMv2_0159_CGC100

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0159_23 HRGMv2_0159_23_4 2875 6069 + 1.B.14.6.1
pfam HRGMv2_0159_23 HRGMv2_0159_23_5 6092 8110 + SusD_RagB | SusD-like_3
TC HRGMv2_0159_23 HRGMv2_0159_23_6 8152 11199 + 1.B.14.6.2
pfam HRGMv2_0159_23 HRGMv2_0159_23_7 11222 12949 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0159_23 HRGMv2_0159_23_8 13020 15131 + PL11_1
CAZyme HRGMv2_0159_23 HRGMv2_0159_23_9 15312 18710 + PL26
CAZyme HRGMv2_0159_23 HRGMv2_0159_23_10 19029 20573 - CE12 | CE12
CAZyme HRGMv2_0159_23 HRGMv2_0159_23_11 20793 21932 - GH105
CAZyme HRGMv2_0159_23 HRGMv2_0159_23_12 22177 24024 + PL11_1
CAZyme HRGMv2_0159_23 HRGMv2_0159_23_13 24021 25430 + GH105
Gene ID: HRGMv2_0159_23_4
Type: TC
Location: 2875 - 6069 (+)
Gene ID: HRGMv2_0159_23_5
Type: pfam
Location: 6092 - 8110 (+)
Gene ID: HRGMv2_0159_23_6
Type: TC
Location: 8152 - 11199 (+)
Gene ID: HRGMv2_0159_23_7
Type: pfam
Location: 11222 - 12949 (+)
Gene ID: HRGMv2_0159_23_8
Type: CAZyme
Location: 13020 - 15131 (+)
Gene ID: HRGMv2_0159_23_9
Type: CAZyme
Location: 15312 - 18710 (+)
Gene ID: HRGMv2_0159_23_10
Type: CAZyme
Location: 19029 - 20573 (-)
Gene ID: HRGMv2_0159_23_11
Type: CAZyme
Location: 20793 - 21932 (-)
Gene ID: HRGMv2_0159_23_12
Type: CAZyme
Location: 22177 - 24024 (+)
Gene ID: HRGMv2_0159_23_13
Type: CAZyme
Location: 24021 - 25430 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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