Cluster: HRGMv2_0156_CGC67

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0156_1	HRGMv2_0156_1_2937	3754572	3756776	-	3.A.10.1.10
TF	HRGMv2_0156_1	HRGMv2_0156_1_2938	3757253	3760081	-	HTH_AraC
NULL(UNKNOWN)	HRGMv2_0156_1	HRGMv2_0156_1_2939	3760324	3762693	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_0156_1	HRGMv2_0156_1_2940	3762776	3764965	+	GH36
pfam	HRGMv2_0156_1	HRGMv2_0156_1_2941	3765343	3766560	-	Aminotran_5 \| DegT_DnrJ_EryC1 \| Cys_Met_Meta_PP
pfam	HRGMv2_0156_1	HRGMv2_0156_1_2942	3766574	3767914	-	SUFBD_core \| SufBD_N
TC	HRGMv2_0156_1	HRGMv2_0156_1_2943	3767931	3768683	-	3.A.1.128.6

Gene ID: HRGMv2_0156_1_2937
Type: TC
Location: 3754572 - 3756776 (-)

Gene ID: HRGMv2_0156_1_2938
Type: TF
Location: 3757253 - 3760081 (-)

Gene ID: HRGMv2_0156_1_2939
Type:
Location: 3760324 - 3762693 (+)

Gene ID: HRGMv2_0156_1_2940
Type: CAZyme
Location: 3762776 - 3764965 (+)

Gene ID: HRGMv2_0156_1_2941
Type: pfam
Location: 3765343 - 3766560 (-)

Gene ID: HRGMv2_0156_1_2942
Type: pfam
Location: 3766574 - 3767914 (-)

Gene ID: HRGMv2_0156_1_2943
Type: TC
Location: 3767931 - 3768683 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.