dbCAN Logo

PROTEIN: HRGMv2_0156_1_2939

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0156_1_2939.pdb
Genome ID:
HRGMv2_0156
Protein ID:
HRGMv2_0156_1_2939

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKKVTFSCLT   LATLLQLIPS   NGNAANIQVN   KKKTNRTEMK   QDTIPANSTK   KESEEGERNV 60
MLNASDANKP   REIQIGLPSE   DVNVYENGLP   AVYSSTVHKL   AAHWRSDSSL   GEVGLLSPSE 120
SAITTGNIAY   SVNSFSKLGQ   KDFQGILNYR   TNHFGMQNFD   FNVSGAINNQ   WLYTASIYQN 180
FDPGSFDLEF   TNYADRTEIY   HAGLTRLFNN   GRGKISLLYK   HSRSENPASY   ANAAPFIYVG 240
DGSVKEIDGF   KLGTNSYVPQ   NGSFPYMDVR   DGKMKTWNLG   DGSENRANEI   ALISDYRFRN 300
DLLWKFNLKY   MDAPRANYVD   FGGSTISEVT   ANDGFTLSNG   DPYEGLAEGR   RTWLHVGKVK 360
NFLITSELNK   TFGNHDLRLG   VNEWYYHLDY   YSSSLQWMAT   VQNYPQLLTS   TTTSSLDPTL 420
TGQRVQTYGY   NELSPEYTKG   YENKLALYFT   DNWQVTPQFN   IYYGGRLEYY   RMSADQISAS 480
RFPGFRIGDF   TTYSKEEETG   NIIATQRSIH   PAKVVKDKLN   YAATLRATYN   VTGQFGLTAD 540
GTVATRFPRI   NEYAGTGPTE   EQYKRVTIPL   IRGGLFYKNK   WINLTSMVTY   ISKSNNIDQQ 600
NLTKPGTEEG   KTVLLIYNIK   TLGWTTSAEI   DPFKGFHLHA   LFTYQKPVYK   NYNASVTFND 660
GSEMSVNANG   MIVKEIPQIL   VELDPSYNIT   KDLRLWLSFR   YFGKTYANLQ   EALYFNGRWE 720
TFGGINWNVN   KHLSLGATVI   NFLNQKGASG   TINGSELITK   EEAAQYAGNY   MSGNYLRPFT 780
VEFSASIKF 789
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0CL48-F1-model_v4 23 789 33 702 0.7482 0.8373
AF-A0A0H3GUM0-F1-model_v4 23 789 29 706 0.7465 0.829
AF-Q9HUX3-F1-model_v4 22 789 31 708 0.7381 0.8204
AF-A0A0H3GNH3-F1-model_v4 21 789 17 709 0.7377 0.804
AF-A0A0H3H0D6-F1-model_v4 25 789 23 672 0.7356 0.8298
AF-Q9I683-F1-model_v4 26 789 32 730 0.7351 0.8065
AF-P75780-F1-model_v4 8 789 17 760 0.734 0.7752
AF-Q9HZT6-F1-model_v4 28 789 37 718 0.7334 0.8165
AF-Q0P814-F1-model_v4 28 789 31 709 0.7332 0.8144
AF-Q8ZRQ2-F1-model_v4 23 789 44 729 0.7285 0.8127
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A223HUM7 GH35 1 789 67 1571 0.419 0.5571
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A223HUM7 GH35 1 789 67 1571 0.419 0.5571
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6z8a-assembly1.cif.gz_A 30 789 1 677 0.7602 0.8277
8a60-assembly1.cif.gz_A 28 789 4 677 0.7595 0.8303
4epa-assembly1.cif.gz_A 31 789 6 631 0.7484 0.8471
8b14-assembly1.cif.gz_A 28 789 12 696 0.7449 0.813
4cu4-assembly1.cif.gz_A 28 789 10 693 0.7409 0.8085
5fp1-assembly1.cif.gz_A 31 789 7 701 0.7359 0.7961
2fcp-assembly1.cif.gz_A 28 789 11 705 0.7358 0.7979
3qlb-assembly2.cif.gz_B 27 789 8 670 0.7354 0.8134
1by5-assembly1.cif.gz_A 27 789 7 697 0.7353 0.7978
2grx-assembly2.cif.gz_B 27 789 8 691 0.7318 0.7983
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-E1W8M5-F1-model_v4 20 789 1 702 0.7547 0.8081
AF-Q01674-F1-model_v4 22 789 27 710 0.753 0.8315
AF-Q47162-F1-model_v4 1 789 7 735 0.7487 0.7925
AF-P0CL48-F1-model_v4 23 789 33 702 0.7482 0.8373
AF-Q9HUX3-F1-model_v4 22 789 31 708 0.7381 0.8204
AF-A0A0H2ZI93-F1-model_v4 23 789 32 708 0.7376 0.8213
AF-P0C2M9-F1-model_v4 24 789 25 672 0.7343 0.8308
AF-P75780-F1-model_v4 8 789 17 760 0.734 0.7752
AF-A1JTG3-F1-model_v4 24 789 25 672 0.7336 0.8297
AF-P46359-F1-model_v4 27 789 26 672 0.7328 0.8302
Download Full SwissProt Results