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Cluster: HRGMv2_0154_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0154_1 HRGMv2_0154_1_207 241642 242805 + 3.A.1.13.2
TC HRGMv2_0154_1 HRGMv2_0154_1_208 243003 244022 + 3.A.1.13.2
TC HRGMv2_0154_1 HRGMv2_0154_1_209 244034 244807 + 3.A.1.13.2
NULL(UNKNOWN) HRGMv2_0154_1 HRGMv2_0154_1_210 244957 245073 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_211 245096 246067 + GT90
pfam HRGMv2_0154_1 HRGMv2_0154_1_212 246394 247422 - EamA | EamA
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_213 247784 249298 - GH29
NULL(UNKNOWN) HRGMv2_0154_1 HRGMv2_0154_1_214 249741 250211 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0154_1 HRGMv2_0154_1_215 250204 252291 - ATP-cone | NRDD
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_216 253018 255366 + GH92
TC HRGMv2_0154_1 HRGMv2_0154_1_217 255944 257539 + 9.A.25.1.1
Gene ID: HRGMv2_0154_1_207
Type: TC
Location: 241642 - 242805 (+)
Gene ID: HRGMv2_0154_1_208
Type: TC
Location: 243003 - 244022 (+)
Gene ID: HRGMv2_0154_1_209
Type: TC
Location: 244034 - 244807 (+)
Gene ID: HRGMv2_0154_1_210
Type:
Location: 244957 - 245073 (+)
Gene ID: HRGMv2_0154_1_211
Type: CAZyme
Location: 245096 - 246067 (+)
Gene ID: HRGMv2_0154_1_212
Type: pfam
Location: 246394 - 247422 (-)
Gene ID: HRGMv2_0154_1_213
Type: CAZyme
Location: 247784 - 249298 (-)
Gene ID: HRGMv2_0154_1_214
Type:
Location: 249741 - 250211 (-)
Gene ID: HRGMv2_0154_1_215
Type: pfam
Location: 250204 - 252291 (-)
Gene ID: HRGMv2_0154_1_216
Type: CAZyme
Location: 253018 - 255366 (+)
Gene ID: HRGMv2_0154_1_217
Type: TC
Location: 255944 - 257539 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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