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Cluster: HRGMv2_0154_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0154_1 HRGMv2_0154_1_139 149698 150972 + 2.A.1.2.97
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_140 150932 152113 - GT4
pfam HRGMv2_0154_1 HRGMv2_0154_1_141 152132 153094 - 2-Hacid_dh | 2-Hacid_dh_C
pfam HRGMv2_0154_1 HRGMv2_0154_1_142 153228 154736 - GH3 | GH3_M | GH3_C
TC HRGMv2_0154_1 HRGMv2_0154_1_143 154847 156187 - 2.A.38.1.1
NULL(UNKNOWN) HRGMv2_0154_1 HRGMv2_0154_1_144 156390 156713 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0154_1 HRGMv2_0154_1_145 156956 160525 - Fer4
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_146 160722 161438 + GT51
Gene ID: HRGMv2_0154_1_139
Type: TC
Location: 149698 - 150972 (+)
Gene ID: HRGMv2_0154_1_140
Type: CAZyme
Location: 150932 - 152113 (-)
Gene ID: HRGMv2_0154_1_141
Type: pfam
Location: 152132 - 153094 (-)
Gene ID: HRGMv2_0154_1_142
Type: pfam
Location: 153228 - 154736 (-)
Gene ID: HRGMv2_0154_1_143
Type: TC
Location: 154847 - 156187 (-)
Gene ID: HRGMv2_0154_1_144
Type:
Location: 156390 - 156713 (+)
Gene ID: HRGMv2_0154_1_145
Type: STP
Location: 156956 - 160525 (-)
Gene ID: HRGMv2_0154_1_146
Type: CAZyme
Location: 160722 - 161438 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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