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Cluster: HRGMv2_0154_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0154_1 HRGMv2_0154_1_46 56234 58672 - 3.A.11.3.1
TC HRGMv2_0154_1 HRGMv2_0154_1_47 58871 59764 + 2.A.115.1.1
STP HRGMv2_0154_1 HRGMv2_0154_1_48 59845 60576 + Pribosyltran
pfam HRGMv2_0154_1 HRGMv2_0154_1_49 60838 61011 + Hc1
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_50 61147 63312 - GH141
pfam HRGMv2_0154_1 HRGMv2_0154_1_51 63654 65300 - SusD_RagB | SusD-like_3
TC HRGMv2_0154_1 HRGMv2_0154_1_52 65313 68930 - 1.B.14.6.1
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_53 69651 71330 + GH156
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_54 71399 73660 + GH141
pfam HRGMv2_0154_1 HRGMv2_0154_1_55 73799 76516 + GH123_N
CAZyme HRGMv2_0154_1 HRGMv2_0154_1_56 76566 79307 + GH106
Gene ID: HRGMv2_0154_1_46
Type: TC
Location: 56234 - 58672 (-)
Gene ID: HRGMv2_0154_1_47
Type: TC
Location: 58871 - 59764 (+)
Gene ID: HRGMv2_0154_1_48
Type: STP
Location: 59845 - 60576 (+)
Gene ID: HRGMv2_0154_1_49
Type: pfam
Location: 60838 - 61011 (+)
Gene ID: HRGMv2_0154_1_50
Type: CAZyme
Location: 61147 - 63312 (-)
Gene ID: HRGMv2_0154_1_51
Type: pfam
Location: 63654 - 65300 (-)
Gene ID: HRGMv2_0154_1_52
Type: TC
Location: 65313 - 68930 (-)
Gene ID: HRGMv2_0154_1_53
Type: CAZyme
Location: 69651 - 71330 (+)
Gene ID: HRGMv2_0154_1_54
Type: CAZyme
Location: 71399 - 73660 (+)
Gene ID: HRGMv2_0154_1_55
Type: pfam
Location: 73799 - 76516 (+)
Gene ID: HRGMv2_0154_1_56
Type: CAZyme
Location: 76566 - 79307 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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