Cluster: HRGMv2_0154_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0154
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0154_8 | HRGMv2_0154_8_20 | 23239 | 26424 | + | GH2 |
| CAZyme | HRGMv2_0154_8 | HRGMv2_0154_8_21 | 26627 | 29368 | + | CBM67 | GH78 |
| pfam | HRGMv2_0154_8 | HRGMv2_0154_8_22 | 29527 | 29754 | + | TatA_B_E |
| TC | HRGMv2_0154_8 | HRGMv2_0154_8_23 | 29792 | 30664 | + | 2.A.64.3.2 |
Gene ID: HRGMv2_0154_8_20
Type: CAZyme
Location: 23239 - 26424 (+)
Type: CAZyme
Location: 23239 - 26424 (+)
Gene ID: HRGMv2_0154_8_21
Type: CAZyme
Location: 26627 - 29368 (+)
Type: CAZyme
Location: 26627 - 29368 (+)
Gene ID: HRGMv2_0154_8_22
Type: pfam
Location: 29527 - 29754 (+)
Type: pfam
Location: 29527 - 29754 (+)
Gene ID: HRGMv2_0154_8_23
Type: TC
Location: 29792 - 30664 (+)
Type: TC
Location: 29792 - 30664 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0154_8_22 | vegan > omnivore | 1.59468 | 0.04238 |