Cluster: HRGMv2_0154_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0154
- CGC Family ID: CGCFAM_01905
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0154_5 | HRGMv2_0154_5_96 | 121089 | 124238 | + | 3.A.12.1.1 |
| pfam | HRGMv2_0154_5 | HRGMv2_0154_5_97 | 124250 | 124900 | + | LolA |
| pfam | HRGMv2_0154_5 | HRGMv2_0154_5_98 | 125155 | 125634 | - | DUF4293 |
| CAZyme | HRGMv2_0154_5 | HRGMv2_0154_5_99 | 125717 | 127423 | - | GT2 |
Gene ID: HRGMv2_0154_5_96
Type: TC
Location: 121089 - 124238 (+)
Type: TC
Location: 121089 - 124238 (+)
Gene ID: HRGMv2_0154_5_97
Type: pfam
Location: 124250 - 124900 (+)
Type: pfam
Location: 124250 - 124900 (+)
Gene ID: HRGMv2_0154_5_98
Type: pfam
Location: 125155 - 125634 (-)
Type: pfam
Location: 125155 - 125634 (-)
Gene ID: HRGMv2_0154_5_99
Type: CAZyme
Location: 125717 - 127423 (-)
Type: CAZyme
Location: 125717 - 127423 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.