Cluster: HRGMv2_0154_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0154
- CGC Family ID: CGCFAM_05186
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0154_4 | HRGMv2_0154_4_147 | 182925 | 184802 | - | GH127 |
| pfam | HRGMv2_0154_4 | HRGMv2_0154_4_148 | 184874 | 185689 | - | Pantoate_transf | PEP_mutase |
| pfam | HRGMv2_0154_4 | HRGMv2_0154_4_149 | 185826 | 186365 | - | SpoU_methylase |
| TC | HRGMv2_0154_4 | HRGMv2_0154_4_150 | 186480 | 188687 | + | 3.A.10.1.10 |
Gene ID: HRGMv2_0154_4_147
Type: CAZyme
Location: 182925 - 184802 (-)
Type: CAZyme
Location: 182925 - 184802 (-)
Gene ID: HRGMv2_0154_4_148
Type: pfam
Location: 184874 - 185689 (-)
Type: pfam
Location: 184874 - 185689 (-)
Gene ID: HRGMv2_0154_4_149
Type: pfam
Location: 185826 - 186365 (-)
Type: pfam
Location: 185826 - 186365 (-)
Gene ID: HRGMv2_0154_4_150
Type: TC
Location: 186480 - 188687 (+)
Type: TC
Location: 186480 - 188687 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.