Cluster: HRGMv2_0154_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0154
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0154_4 | HRGMv2_0154_4_92 | 111278 | 113149 | + | GH32 |
| CAZyme | HRGMv2_0154_4 | HRGMv2_0154_4_93 | 113191 | 115401 | + | GH36 |
| TC | HRGMv2_0154_4 | HRGMv2_0154_4_94 | 115422 | 116585 | + | 2.A.1.7.17 |
Gene ID: HRGMv2_0154_4_92
Type: CAZyme
Location: 111278 - 113149 (+)
Type: CAZyme
Location: 111278 - 113149 (+)
Gene ID: HRGMv2_0154_4_93
Type: CAZyme
Location: 113191 - 115401 (+)
Type: CAZyme
Location: 113191 - 115401 (+)
Gene ID: HRGMv2_0154_4_94
Type: TC
Location: 115422 - 116585 (+)
Type: TC
Location: 115422 - 116585 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.