Cluster: HRGMv2_0154_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0154
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0154_1 | HRGMv2_0154_1_29 | 33951 | 35297 | - | GT30 |
| TF | HRGMv2_0154_1 | HRGMv2_0154_1_30 | 35303 | 35968 | - | 0037767 |
| pfam | HRGMv2_0154_1 | HRGMv2_0154_1_31 | 36113 | 38185 | - | Rotamase | Rotamase_2 | Rotamase_3 | SurA_N_2 | SurA_N_3 |
| TC | HRGMv2_0154_1 | HRGMv2_0154_1_32 | 38305 | 39597 | - | 9.A.40.2.2 |
Gene ID: HRGMv2_0154_1_29
Type: CAZyme
Location: 33951 - 35297 (-)
Type: CAZyme
Location: 33951 - 35297 (-)
Gene ID: HRGMv2_0154_1_30
Type: TF
Location: 35303 - 35968 (-)
Type: TF
Location: 35303 - 35968 (-)
Gene ID: HRGMv2_0154_1_31
Type: pfam
Location: 36113 - 38185 (-)
Type: pfam
Location: 36113 - 38185 (-)
Gene ID: HRGMv2_0154_1_32
Type: TC
Location: 38305 - 39597 (-)
Type: TC
Location: 38305 - 39597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.