Cluster: HRGMv2_0154_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0154
- CGC Family ID: CGCFAM_05940
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0154_3 | HRGMv2_0154_3_251 | 301093 | 302949 | + | GT83 |
| pfam | HRGMv2_0154_3 | HRGMv2_0154_3_252 | 302989 | 303363 | + | GtrA_DPMS_TM |
| pfam | HRGMv2_0154_3 | HRGMv2_0154_3_253 | 303378 | 303929 | + | Hexapep | Mac | Hexapep_2 |
| CAZyme | HRGMv2_0154_3 | HRGMv2_0154_3_254 | 304150 | 306186 | - | GH13_8 |
| TC | HRGMv2_0154_3 | HRGMv2_0154_3_255 | 306359 | 308038 | + | 2.A.17.4.2 |
Gene ID: HRGMv2_0154_3_251
Type: CAZyme
Location: 301093 - 302949 (+)
Type: CAZyme
Location: 301093 - 302949 (+)
Gene ID: HRGMv2_0154_3_252
Type: pfam
Location: 302989 - 303363 (+)
Type: pfam
Location: 302989 - 303363 (+)
Gene ID: HRGMv2_0154_3_253
Type: pfam
Location: 303378 - 303929 (+)
Type: pfam
Location: 303378 - 303929 (+)
Gene ID: HRGMv2_0154_3_254
Type: CAZyme
Location: 304150 - 306186 (-)
Type: CAZyme
Location: 304150 - 306186 (-)
Gene ID: HRGMv2_0154_3_255
Type: TC
Location: 306359 - 308038 (+)
Type: TC
Location: 306359 - 308038 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.