Cluster: HRGMv2_0154_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0154
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0154_3 | HRGMv2_0154_3_144 | 178307 | 179380 | + | GH171 |
| CAZyme | HRGMv2_0154_3 | HRGMv2_0154_3_145 | 179370 | 181907 | + | GH20 |
| peptidase | HRGMv2_0154_3 | HRGMv2_0154_3_146 | 181919 | 183217 | + | S12.UPW |
| TC | HRGMv2_0154_3 | HRGMv2_0154_3_147 | 183554 | 185362 | - | 3.A.6.1.1 |
Gene ID: HRGMv2_0154_3_144
Type: CAZyme
Location: 178307 - 179380 (+)
Type: CAZyme
Location: 178307 - 179380 (+)
Gene ID: HRGMv2_0154_3_145
Type: CAZyme
Location: 179370 - 181907 (+)
Type: CAZyme
Location: 179370 - 181907 (+)
Gene ID: HRGMv2_0154_3_146
Type: peptidase
Location: 181919 - 183217 (+)
Type: peptidase
Location: 181919 - 183217 (+)
Gene ID: HRGMv2_0154_3_147
Type: TC
Location: 183554 - 185362 (-)
Type: TC
Location: 183554 - 185362 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.