Cluster: HRGMv2_0154_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0154
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0154_3 | HRGMv2_0154_3_92 | 103370 | 106045 | + | CBM67 | GH78 |
| pfam | HRGMv2_0154_3 | HRGMv2_0154_3_93 | 106278 | 107027 | - | Calycin_like |
| TC | HRGMv2_0154_3 | HRGMv2_0154_3_94 | 107338 | 108078 | + | 3.A.1.140.1 |
Gene ID: HRGMv2_0154_3_92
Type: CAZyme
Location: 103370 - 106045 (+)
Type: CAZyme
Location: 103370 - 106045 (+)
Gene ID: HRGMv2_0154_3_93
Type: pfam
Location: 106278 - 107027 (-)
Type: pfam
Location: 106278 - 107027 (-)
Gene ID: HRGMv2_0154_3_94
Type: TC
Location: 107338 - 108078 (+)
Type: TC
Location: 107338 - 108078 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.