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Cluster: HRGMv2_0154_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_278 325294 328179 - GH106
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_279 328480 330825 - GH31
TC HRGMv2_0154_2 HRGMv2_0154_2_280 331830 333377 + 3.A.2.1.2
pfam HRGMv2_0154_2 HRGMv2_0154_2_281 333374 333610 + ATP-synt_DE_N
NULL(UNKNOWN) HRGMv2_0154_2 HRGMv2_0154_2_282 333659 334084 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0154_2 HRGMv2_0154_2_283 334087 335280 + 3.A.2.1.7
TC HRGMv2_0154_2 HRGMv2_0154_2_284 335364 335612 + 3.A.2.1.6
pfam HRGMv2_0154_2 HRGMv2_0154_2_285 335633 336148 + ATP-synt_B | YMF19
pfam HRGMv2_0154_2 HRGMv2_0154_2_286 336161 336715 + OSCP
TC HRGMv2_0154_2 HRGMv2_0154_2_287 336762 338342 + 3.A.2.1.7
TC HRGMv2_0154_2 HRGMv2_0154_2_288 338346 339215 + 3.A.2.1.7
pfam HRGMv2_0154_2 HRGMv2_0154_2_289 339467 340840 - MatE | MatE
TC HRGMv2_0154_2 HRGMv2_0154_2_290 341567 343054 - 1.B.17.3.5
TC HRGMv2_0154_2 HRGMv2_0154_2_291 343091 346255 - 2.A.6.2.22
TC HRGMv2_0154_2 HRGMv2_0154_2_292 346281 347495 - 2.A.6.2.29
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_293 348704 351580 + GH106
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_294 351713 353200 + GH28
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_295 353249 354007 + GH28
NULL(UNKNOWN) HRGMv2_0154_2 HRGMv2_0154_2_296 353896 354222 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_297 354398 357301 + GH106
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_298 357446 358933 + GH28
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_299 358993 361878 + GH106
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_300 361954 363423 + GH28
TC HRGMv2_0154_2 HRGMv2_0154_2_301 363596 365584 + 9.B.14.3.1
Gene ID: HRGMv2_0154_2_278
Type: CAZyme
Location: 325294 - 328179 (-)
Gene ID: HRGMv2_0154_2_279
Type: CAZyme
Location: 328480 - 330825 (-)
Gene ID: HRGMv2_0154_2_280
Type: TC
Location: 331830 - 333377 (+)
Gene ID: HRGMv2_0154_2_281
Type: pfam
Location: 333374 - 333610 (+)
Gene ID: HRGMv2_0154_2_282
Type:
Location: 333659 - 334084 (+)
Gene ID: HRGMv2_0154_2_283
Type: TC
Location: 334087 - 335280 (+)
Gene ID: HRGMv2_0154_2_284
Type: TC
Location: 335364 - 335612 (+)
Gene ID: HRGMv2_0154_2_285
Type: pfam
Location: 335633 - 336148 (+)
Gene ID: HRGMv2_0154_2_286
Type: pfam
Location: 336161 - 336715 (+)
Gene ID: HRGMv2_0154_2_287
Type: TC
Location: 336762 - 338342 (+)
Gene ID: HRGMv2_0154_2_288
Type: TC
Location: 338346 - 339215 (+)
Gene ID: HRGMv2_0154_2_289
Type: pfam
Location: 339467 - 340840 (-)
Gene ID: HRGMv2_0154_2_290
Type: TC
Location: 341567 - 343054 (-)
Gene ID: HRGMv2_0154_2_291
Type: TC
Location: 343091 - 346255 (-)
Gene ID: HRGMv2_0154_2_292
Type: TC
Location: 346281 - 347495 (-)
Gene ID: HRGMv2_0154_2_293
Type: CAZyme
Location: 348704 - 351580 (+)
Gene ID: HRGMv2_0154_2_294
Type: CAZyme
Location: 351713 - 353200 (+)
Gene ID: HRGMv2_0154_2_295
Type: CAZyme
Location: 353249 - 354007 (+)
Gene ID: HRGMv2_0154_2_296
Type:
Location: 353896 - 354222 (-)
Gene ID: HRGMv2_0154_2_297
Type: CAZyme
Location: 354398 - 357301 (+)
Gene ID: HRGMv2_0154_2_298
Type: CAZyme
Location: 357446 - 358933 (+)
Gene ID: HRGMv2_0154_2_299
Type: CAZyme
Location: 358993 - 361878 (+)
Gene ID: HRGMv2_0154_2_300
Type: CAZyme
Location: 361954 - 363423 (+)
Gene ID: HRGMv2_0154_2_301
Type: TC
Location: 363596 - 365584 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0154_2_281 vegetarian > omnivore 2.04270 0.02164
HRGMv2_0154_2_284 vegetarian > omnivore 1.20175 0.02164
HRGMv2_0154_2_285 vegan > omnivore 1.83324 0.04238
HRGMv2_0154_2_285 vegetarian > omnivore 2.57969 0.02164
HRGMv2_0154_2_294 vegan > omnivore 1.30043 0.04238
HRGMv2_0154_2_294 vegetarian > omnivore 2.85588 0.02164

🧭 Explore Read Mapping of CGC

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