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Cluster: HRGMv2_0154_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0154_2 HRGMv2_0154_2_230 262106 263233 - GT28
TC HRGMv2_0154_2 HRGMv2_0154_2_231 263317 264621 - 2.A.103.1.8
pfam HRGMv2_0154_2 HRGMv2_0154_2_232 264728 266074 - Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC HRGMv2_0154_2 HRGMv2_0154_2_233 266077 267324 - 9.B.146.1.6
pfam HRGMv2_0154_2 HRGMv2_0154_2_234 267340 269040 - PQQ_2 | PQQ_2
pfam HRGMv2_0154_2 HRGMv2_0154_2_235 269323 270774 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
TC HRGMv2_0154_2 HRGMv2_0154_2_236 271178 273541 - 2.A.37.5.2
Gene ID: HRGMv2_0154_2_230
Type: CAZyme
Location: 262106 - 263233 (-)
Gene ID: HRGMv2_0154_2_231
Type: TC
Location: 263317 - 264621 (-)
Gene ID: HRGMv2_0154_2_232
Type: pfam
Location: 264728 - 266074 (-)
Gene ID: HRGMv2_0154_2_233
Type: TC
Location: 266077 - 267324 (-)
Gene ID: HRGMv2_0154_2_234
Type: pfam
Location: 267340 - 269040 (-)
Gene ID: HRGMv2_0154_2_235
Type: pfam
Location: 269323 - 270774 (-)
Gene ID: HRGMv2_0154_2_236
Type: TC
Location: 271178 - 273541 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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