Cluster: HRGMv2_0154_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0154
- CGC Family ID: CGCFAM_09509
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0154_2 | HRGMv2_0154_2_111 | 123687 | 124640 | + | 3.A.5.1.1 |
| pfam | HRGMv2_0154_2 | HRGMv2_0154_2_112 | 124966 | 125481 | - | DUF1573 | HYDIN_VesB_CFA65-like_Ig |
| CAZyme | HRGMv2_0154_2 | HRGMv2_0154_2_113 | 125468 | 126676 | - | GH163 |
Gene ID: HRGMv2_0154_2_111
Type: TC
Location: 123687 - 124640 (+)
Type: TC
Location: 123687 - 124640 (+)
Gene ID: HRGMv2_0154_2_112
Type: pfam
Location: 124966 - 125481 (-)
Type: pfam
Location: 124966 - 125481 (-)
Gene ID: HRGMv2_0154_2_113
Type: CAZyme
Location: 125468 - 126676 (-)
Type: CAZyme
Location: 125468 - 126676 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.