Cluster: HRGMv2_0154_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0154
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0154_1 | HRGMv2_0154_1_5 | 6712 | 7758 | - | GH43_33 |
| pfam | HRGMv2_0154_1 | HRGMv2_0154_1_6 | 8009 | 9301 | - | OEP | OEP |
| TC | HRGMv2_0154_1 | HRGMv2_0154_1_7 | 9338 | 12481 | - | 2.A.6.2.38 |
Gene ID: HRGMv2_0154_1_5
Type: CAZyme
Location: 6712 - 7758 (-)
Type: CAZyme
Location: 6712 - 7758 (-)
Gene ID: HRGMv2_0154_1_6
Type: pfam
Location: 8009 - 9301 (-)
Type: pfam
Location: 8009 - 9301 (-)
Gene ID: HRGMv2_0154_1_7
Type: TC
Location: 9338 - 12481 (-)
Type: TC
Location: 9338 - 12481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp900539755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.