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Cluster: HRGMv2_0149_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0149_4 HRGMv2_0149_4_59 67224 68114 - 1.A.1.24.3
TC HRGMv2_0149_4 HRGMv2_0149_4_60 68249 70108 - 2.A.9.3.1
peptidase HRGMv2_0149_4 HRGMv2_0149_4_61 70138 71736 - C26.964
TC HRGMv2_0149_4 HRGMv2_0149_4_62 72076 73557 + 9.B.168.1.2
TC HRGMv2_0149_4 HRGMv2_0149_4_63 73568 74197 + 1.A.62.2.1
CAZyme HRGMv2_0149_4 HRGMv2_0149_4_64 74208 74903 - GT51
TC HRGMv2_0149_4 HRGMv2_0149_4_65 74986 75702 - 9.B.186.1.3
Gene ID: HRGMv2_0149_4_59
Type: TC
Location: 67224 - 68114 (-)
Gene ID: HRGMv2_0149_4_60
Type: TC
Location: 68249 - 70108 (-)
Gene ID: HRGMv2_0149_4_61
Type: peptidase
Location: 70138 - 71736 (-)
Gene ID: HRGMv2_0149_4_62
Type: TC
Location: 72076 - 73557 (+)
Gene ID: HRGMv2_0149_4_63
Type: TC
Location: 73568 - 74197 (+)
Gene ID: HRGMv2_0149_4_64
Type: CAZyme
Location: 74208 - 74903 (-)
Gene ID: HRGMv2_0149_4_65
Type: TC
Location: 74986 - 75702 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0149_4_59 vegetarian > vegan 1.51728 0.03781

🧭 Explore Read Mapping of CGC

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