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Cluster: HRGMv2_0148_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0148_16 HRGMv2_0148_16_1 70 2451 + CBM32
pfam HRGMv2_0148_16 HRGMv2_0148_16_2 2478 3626 + F5_F8_type_C | Big_2 | Big_2
TC HRGMv2_0148_16 HRGMv2_0148_16_3 3669 6794 + 1.B.14.6.1
pfam HRGMv2_0148_16 HRGMv2_0148_16_4 6811 8655 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0148_16 HRGMv2_0148_16_5 8794 10932 + PL8_3
sulfatase HRGMv2_0148_16 HRGMv2_0148_16_6 10936 12474 + S1_46
TC HRGMv2_0148_16 HRGMv2_0148_16_7 12537 14231 - 2.A.58.2.2
Gene ID: HRGMv2_0148_16_1
Type: CAZyme
Location: 70 - 2451 (+)
Gene ID: HRGMv2_0148_16_2
Type: pfam
Location: 2478 - 3626 (+)
Gene ID: HRGMv2_0148_16_3
Type: TC
Location: 3669 - 6794 (+)
Gene ID: HRGMv2_0148_16_4
Type: pfam
Location: 6811 - 8655 (+)
Gene ID: HRGMv2_0148_16_5
Type: CAZyme
Location: 8794 - 10932 (+)
Gene ID: HRGMv2_0148_16_6
Type: sulfatase
Location: 10936 - 12474 (+)
Gene ID: HRGMv2_0148_16_7
Type: TC
Location: 12537 - 14231 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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