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Cluster: HRGMv2_0148_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0148_135 HRGMv2_0148_135_21 31946 33022 + GT4
CAZyme HRGMv2_0148_135 HRGMv2_0148_135_22 33050 34312 + GT4
CAZyme HRGMv2_0148_135 HRGMv2_0148_135_23 34305 35069 + GT2
TC HRGMv2_0148_135 HRGMv2_0148_135_24 35129 37618 - 9.B.144.1.4
pfam HRGMv2_0148_135 HRGMv2_0148_135_25 37709 38404 + PNP_UDP_1
pfam HRGMv2_0148_135 HRGMv2_0148_135_26 38412 38891 + LuxS
CAZyme HRGMv2_0148_135 HRGMv2_0148_135_27 38958 41363 - GH2
CAZyme HRGMv2_0148_135 HRGMv2_0148_135_28 41373 42986 - GH30_4
TC HRGMv2_0148_135 HRGMv2_0148_135_29 43067 44764 - 8.A.46.1.3
TC HRGMv2_0148_135 HRGMv2_0148_135_30 44778 47819 - 1.B.14.6.1
Gene ID: HRGMv2_0148_135_21
Type: CAZyme
Location: 31946 - 33022 (+)
Gene ID: HRGMv2_0148_135_22
Type: CAZyme
Location: 33050 - 34312 (+)
Gene ID: HRGMv2_0148_135_23
Type: CAZyme
Location: 34305 - 35069 (+)
Gene ID: HRGMv2_0148_135_24
Type: TC
Location: 35129 - 37618 (-)
Gene ID: HRGMv2_0148_135_25
Type: pfam
Location: 37709 - 38404 (+)
Gene ID: HRGMv2_0148_135_26
Type: pfam
Location: 38412 - 38891 (+)
Gene ID: HRGMv2_0148_135_27
Type: CAZyme
Location: 38958 - 41363 (-)
Gene ID: HRGMv2_0148_135_28
Type: CAZyme
Location: 41373 - 42986 (-)
Gene ID: HRGMv2_0148_135_29
Type: TC
Location: 43067 - 44764 (-)
Gene ID: HRGMv2_0148_135_30
Type: TC
Location: 44778 - 47819 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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