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Cluster: HRGMv2_0148_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0148_127 HRGMv2_0148_127_27 29238 29843 - 3.A.8.1.1
TC HRGMv2_0148_127 HRGMv2_0148_127_28 30812 31918 + 2.A.6.1.5
TF HRGMv2_0148_127 HRGMv2_0148_127_29 31875 32765 + LytTR
TC HRGMv2_0148_127 HRGMv2_0148_127_30 32884 34503 + 3.A.1.121.4
TC HRGMv2_0148_127 HRGMv2_0148_127_31 34618 35829 + 9.B.97.1.2
pfam HRGMv2_0148_127 HRGMv2_0148_127_32 35836 36315 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
CAZyme HRGMv2_0148_127 HRGMv2_0148_127_33 36457 37347 + GH73
Gene ID: HRGMv2_0148_127_27
Type: TC
Location: 29238 - 29843 (-)
Gene ID: HRGMv2_0148_127_28
Type: TC
Location: 30812 - 31918 (+)
Gene ID: HRGMv2_0148_127_29
Type: TF
Location: 31875 - 32765 (+)
Gene ID: HRGMv2_0148_127_30
Type: TC
Location: 32884 - 34503 (+)
Gene ID: HRGMv2_0148_127_31
Type: TC
Location: 34618 - 35829 (+)
Gene ID: HRGMv2_0148_127_32
Type: pfam
Location: 35836 - 36315 (-)
Gene ID: HRGMv2_0148_127_33
Type: CAZyme
Location: 36457 - 37347 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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