Cluster: HRGMv2_0148_CGC49
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0148
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0148_125 | HRGMv2_0148_125_25 | 20078 | 23047 | + | GH3 |
| STP | HRGMv2_0148_125 | HRGMv2_0148_125_26 | 23169 | 23336 | + | Fer4 | Fer4 |
| STP | HRGMv2_0148_125 | HRGMv2_0148_125_27 | 23615 | 24808 | - | Aminotran_1_2 |
| TC | HRGMv2_0148_125 | HRGMv2_0148_125_28 | 24895 | 25596 | - | 1.A.14.2.2 |
Gene ID: HRGMv2_0148_125_25
Type: CAZyme
Location: 20078 - 23047 (+)
Type: CAZyme
Location: 20078 - 23047 (+)
Gene ID: HRGMv2_0148_125_26
Type: STP
Location: 23169 - 23336 (+)
Type: STP
Location: 23169 - 23336 (+)
Gene ID: HRGMv2_0148_125_27
Type: STP
Location: 23615 - 24808 (-)
Type: STP
Location: 23615 - 24808 (-)
Gene ID: HRGMv2_0148_125_28
Type: TC
Location: 24895 - 25596 (-)
Type: TC
Location: 24895 - 25596 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.