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Cluster: HRGMv2_0148_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0148_117 HRGMv2_0148_117_1 263 1114 + 3.A.1.132.6
NULL(UNKNOWN) HRGMv2_0148_117 HRGMv2_0148_117_2 1128 2006 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0148_117 HRGMv2_0148_117_3 2003 2383 + GntR
CAZyme HRGMv2_0148_117 HRGMv2_0148_117_4 2473 3693 - GT30
pfam HRGMv2_0148_117 HRGMv2_0148_117_5 3702 5219 - tRNA-synt_1c | Anticodon_2
STP HRGMv2_0148_117 HRGMv2_0148_117_6 5305 7362 + HD
CAZyme HRGMv2_0148_117 HRGMv2_0148_117_7 7421 10288 - GH2
TC HRGMv2_0148_117 HRGMv2_0148_117_8 10386 11843 - 2.A.1.14.25
pfam HRGMv2_0148_117 HRGMv2_0148_117_9 12063 12983 - KduI
TC HRGMv2_0148_117 HRGMv2_0148_117_10 13008 14399 - 4.A.5.1.4
Gene ID: HRGMv2_0148_117_1
Type: TC
Location: 263 - 1114 (+)
Gene ID: HRGMv2_0148_117_2
Type:
Location: 1128 - 2006 (+)
Gene ID: HRGMv2_0148_117_3
Type: TF
Location: 2003 - 2383 (+)
Gene ID: HRGMv2_0148_117_4
Type: CAZyme
Location: 2473 - 3693 (-)
Gene ID: HRGMv2_0148_117_5
Type: pfam
Location: 3702 - 5219 (-)
Gene ID: HRGMv2_0148_117_6
Type: STP
Location: 5305 - 7362 (+)
Gene ID: HRGMv2_0148_117_7
Type: CAZyme
Location: 7421 - 10288 (-)
Gene ID: HRGMv2_0148_117_8
Type: TC
Location: 10386 - 11843 (-)
Gene ID: HRGMv2_0148_117_9
Type: pfam
Location: 12063 - 12983 (-)
Gene ID: HRGMv2_0148_117_10
Type: TC
Location: 13008 - 14399 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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