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Cluster: HRGMv2_0148_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0148_115 HRGMv2_0148_115_49 48147 49367 - 3.A.1.122.1
TC HRGMv2_0148_115 HRGMv2_0148_115_50 49391 50137 - 3.A.1.122.2
pfam HRGMv2_0148_115 HRGMv2_0148_115_51 50150 51367 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC HRGMv2_0148_115 HRGMv2_0148_115_52 51380 52723 - 3.A.1.109.5
pfam HRGMv2_0148_115 HRGMv2_0148_115_53 52866 53084 + DUF4492
TC HRGMv2_0148_115 HRGMv2_0148_115_54 53126 54622 + 3.D.4.3.2
pfam HRGMv2_0148_115 HRGMv2_0148_115_55 54656 55807 + Cyt_bd_oxida_II
CAZyme HRGMv2_0148_115 HRGMv2_0148_115_56 56130 58631 + CBM91 | GH43_19 | GH43_9
CAZyme HRGMv2_0148_115 HRGMv2_0148_115_57 58649 60139 + GH30_2
CAZyme HRGMv2_0148_115 HRGMv2_0148_115_58 60218 61408 + GH97
pfam HRGMv2_0148_115 HRGMv2_0148_115_59 61408 61836 + GH97_C
CAZyme HRGMv2_0148_115 HRGMv2_0148_115_60 61984 62544 + GH43_10
CAZyme HRGMv2_0148_115 HRGMv2_0148_115_61 62548 63636 + CBM91 | GH43_10
CAZyme HRGMv2_0148_115 HRGMv2_0148_115_62 63649 64869 + GH88
Gene ID: HRGMv2_0148_115_49
Type: TC
Location: 48147 - 49367 (-)
Gene ID: HRGMv2_0148_115_50
Type: TC
Location: 49391 - 50137 (-)
Gene ID: HRGMv2_0148_115_51
Type: pfam
Location: 50150 - 51367 (-)
Gene ID: HRGMv2_0148_115_52
Type: TC
Location: 51380 - 52723 (-)
Gene ID: HRGMv2_0148_115_53
Type: pfam
Location: 52866 - 53084 (+)
Gene ID: HRGMv2_0148_115_54
Type: TC
Location: 53126 - 54622 (+)
Gene ID: HRGMv2_0148_115_55
Type: pfam
Location: 54656 - 55807 (+)
Gene ID: HRGMv2_0148_115_56
Type: CAZyme
Location: 56130 - 58631 (+)
Gene ID: HRGMv2_0148_115_57
Type: CAZyme
Location: 58649 - 60139 (+)
Gene ID: HRGMv2_0148_115_58
Type: CAZyme
Location: 60218 - 61408 (+)
Gene ID: HRGMv2_0148_115_59
Type: pfam
Location: 61408 - 61836 (+)
Gene ID: HRGMv2_0148_115_60
Type: CAZyme
Location: 61984 - 62544 (+)
Gene ID: HRGMv2_0148_115_61
Type: CAZyme
Location: 62548 - 63636 (+)
Gene ID: HRGMv2_0148_115_62
Type: CAZyme
Location: 63649 - 64869 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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